Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3212 ATGAGATCAGGTTCTTCACCTTGTGCTTCTTGCAAATTGTTGAGAAGGCGTTGCACACAAGAATGTATCTTTGCCCCTTACTTTCCTTCAGATGAGCCAAGAAAGTTTGCTATTGTTCATAAGGTCTTTGGTGCTAGCAATATTAGCAAAATGCTGCAGGAGCTTCCAATTCATCAAAGAGCAGAAGCAGTGACCAGTTTAGTTTTTGAAGCAAATGCAAGAGTAAGAGATCCTGTTTATGGATGTGTTGGAGCCATATCATACCTTCAAAATCAAGTTTCACAATTACAAATGCAACTTGCAATTGCTCAATCAGAGATTCTTTGCATCCAGATGCAGCAAGACTCTACCACAGTTACCAACTCATTACCAACACATGTTGACCAAGATGACAAATTGATACTACTATCTGAAAATAGTACTAATTGCTATGGAGTTCTTCCACAGTATATTAACTTTCCTTCTTCTTCTTCCTCATCTTCCAATGTATTCCAAGATTATGAGCCTCTTAAGAGAGAGACTTTTTGGACTTAA 534 0.3801 MRSGSSPCASCKLLRRRCTQECIFAPYFPSDEPRKFAIVHKVFGASNISKMLQELPIHQRAEAVTSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAIAQSEILCIQMQQDSTTVTNSLPTHVDQDDKLILLSENSTNCYGVLPQYINFPSSSSSSSNVFQDYEPLKRETFWT* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3212 177 Coils Coil 86 106 - -
Mal2g3212 177 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 174 - -
Mal2g3212 177 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Mal2g3212 177 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Mal2g3212 177 PANTHER LATERAL ORGAN BOUNDARIES (LOB) DOMAIN PROTEIN 1 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3212 Mal-Chr2 46483622 46484997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g3212 4 177 AS2 family AT2G30130 62.963 7.55e-78 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mal2g3212 LOB 1.2e-41 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g3212 2 46483622 46484997 Mal2g3212 2 46483622 46484997 ECH