Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3201 ATGGCTTTTTCAGCTTATGAAGAAATGTATATTCTCCCTGGGATCATAATCACTGGAGCACTAGTAATTGCTTTTACATTTTTCATTCTCACAATGTTAGGGTGGTGCAGGCTTACCAATCATGAATCAACAATTCCTACAACAGGCATATCTTATGATGACAAATTTTCTGCTTGCATGAGTTTAGAGTCACATTCAATCACATTTCTTTACAATGAAGCTGATGATGCACAAGGCGTAAACCAGACTGAATGTGTTATCTGCTTAACTCACTTTCAAGAAGATGAAAGCGTTCGGAAGCTTCACACATGGAATCACATGTTTCATACATCTTGCATTGATAAGTGGCTCGCCTCTCATTTGGGGTGTCCATTGTGTCGCTCTCAGATTGATCAAGTAACTTCGCCAAATGGATCATTGGCAAATGATCATATGATTGTGGACATTGTTGACTCTAGGATTCAGAATATTCTGGTTCATAGCAACCTACTAGTGACAATGACATAG 507 0.3866 MAFSAYEEMYILPGIIITGALVIAFTFFILTMLGWCRLTNHESTIPTTGISYDDKFSACMSLESHSITFLYNEADDAQGVNQTECVICLTHFQEDESVRKLHTWNHMFHTSCIDKWLASHLGCPLCRSQIDQVTSPNGSLANDHMIVDIVDSRIQNILVHSNLLVTMT* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3201 168 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 49 144 - -
Mal2g3201 168 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 62 135 IPR013083 -
Mal2g3201 168 ProSiteProfiles Zinc finger RING-type profile. 85 127 IPR001841 -
Mal2g3201 168 SUPERFAMILY RING/U-box 84 135 - -
Mal2g3201 168 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 49 144 IPR044675 -
Mal2g3201 168 Pfam Ring finger domain 84 127 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3201 Mal-Chr2 46346010 46346516 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g3201 6 166 Rapid Response to Elicitors AT3G05200 27.168 1.18e-16 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3201 - - gmx:102661636 203.371