Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3190 ATGAAGAAGATTAATGAGCTAAGCACCCTTTGCGGGGTAGATGGATGCGCAATAATCTATGGTGAAAATCATCGTCAAGCAGAAATTTGGCCATCCGCGATAGGAGTAGCAAGTGTGTTGTACAAGTTCATGAATTTGTCTGAACACGAACGAAACAAGAAGATGGTGGATTTGGATAGCTTCTGGATGCAAAGCATTGAAAAAGCACAAGAGAAGTATGAGAAACAAATGGTGGAAAACAAGAAGAAAGATATGGCTGATTTGATACGTGAATATGCTTATAGTGGTGAATATAAAATCGGTGATGTGAGCTTAAATTATCTCAATGAGATAACAACTTTGATTGATAACAATCTGAAGGAAGTCAATCAGAGATTGGAATCATTGGAAGTCCAAGCTCAAGACGAGGTTGTAAATGGAGCTGAAGCTATGAATGGAGGAAATTTGTTGACTAGTACGAGCATTGCTCAAGTGCCCAATATGGGTGATGTAGTTGATACCCACGGTTATGGGACTAACATGAATTACGGTTTGCCAAGTGATGAGCAACTAGTTATGGACTCTATCATGCCACCATTTGAAGATTTGGATCTATCTAATCCTTAA 606 0.3894 MKKINELSTLCGVDGCAIIYGENHRQAEIWPSAIGVASVLYKFMNLSEHERNKKMVDLDSFWMQSIEKAQEKYEKQMVENKKKDMADLIREYAYSGEYKIGDVSLNYLNEITTLIDNNLKEVNQRLESLEVQAQDEVVNGAEAMNGGNLLTSTSIAQVPNMGDVVDTHGYGTNMNYGLPSDEQLVMDSIMPPFEDLDLSNP* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3190 201 Coils Coil 63 83 - -
Mal2g3190 201 SUPERFAMILY SRF-like 1 67 IPR036879 GO:0003677|GO:0046983
Mal2g3190 201 PANTHER MADS BOX PROTEIN 1 134 - -
Mal2g3190 201 Coils Coil 119 139 - -
Mal2g3190 201 PANTHER MADS-BOX TRANSCRIPTION FACTOR FAMILY PROTEIN 1 134 - -
Mal2g3190 201 Gene3D - 1 95 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3190 Mal-Chr2 46085805 46086410 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g3190 4 183 Type I MADS-box Gene Family AT5G48670 31.720 4.43e-22 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Mal2g3190 SRF-TF 2.3e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3190 - - mtr:MTR_3g031100 272.707