Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3178 ATGAAGAGAGATCACCAAGAAAGCTTCTCTGAAGGAGTGAGCAATAACACCAACACCAACACCAACAACAAAAACATTATAAACTTTGGTGAATGTTCATCAATGCAAAACACAAACACAAAACAAAACATGTGGAGAGAAGAAAAAGAAACCAACGGTGGTGGAATGGACGAGTTGTTAGCAGCATTAGGTTACAAGGTTCGTTCATCAGACATGGTTGACGTAGCTCAAAAGCTTGAACAACTTGAGATGGTTATGGGTAGTGCTCAAGAAGAAGGTATCAACCATCTTTCTTCTGATACTGTTCACTATGACCCAACCGATCTATATTCTTGGGTTCAAACCATGCTCACTGAACTCAACCCTGATTCACAAATCAATGACCCTTTGAACCCTTCTTCTTCTTCTTCAATCCTCAACAACACTTTCAATGATGATTCTCAGTATGATCTTAGCGCTATTCCTGGAATGGCCGCATACCCACCTCAAAACCATAACCAAATCAATGAAATCCAACTTTCCAACAGTAACAAGCGCTTGAAAACAACTTGGGGTGATGAATCTGAATCGGAAGATATTCATCTTCTGCCGGCGGGTTCTCCGGCGGTTTCTCCGGTGGTGGAGAATACAAGACCGGTGGTTCTTGTTGACACACAAGAAACTGGTGTTCGTCTTGTTCATACCTTAAATGCTTGTGCAGAAGCGATTCAGCAAGAGAATCTGAAACTCGCAGAAGCTCTTGTGAAGCATATTGGGTTATTAGCTTCATTGCAAACCGGTTCTGTGCGAAAAGTTGCTTCTTATTTCGCACAAGCACTTGCAAGAAGAATCTACGGTAACCCAGAAGAAACAATAGATTCATCTTTCTCCGAAATTCTTCACTTGCACTTTTATGAATCTTCACCTTATCTCAAATTCGCTCATTTCACCGCAAATCAAGCTATTCTCGAAGCTTTCGCCGGTGCTGGAAGAGTTCATGTTATAGATTTTGGTCTCAAACAAGGGATGCAGTGGCCAGCGCTTATGCAAGCGCTGGCATTACGCCCCGGCGGTCCTCCGACGTTCCGTTTAACCGGCATCGGACCGCCGCAGGCGGACAACACTGATGCTTTACAACAAGTGGGCTGGAAATTGGCTCAGCTTGCACAAACCATCGGTGTTCAGTTCGAATTTCGTGGATTTGTCTGTAACAGTATAGCGGATCTTGACCCGGATATGCTTGAGATCCGACCCGGTGAAGCTGTTGCTGTTAACTCGGTTTTTGAGCTTCATACTATGTTAGCCCGACCCGGTTCAGTTGAGAAAGTTCTCAACACTGTTAAGAAGATTAACCCTAAGATTGTGACTATCGTTGAGCAAGAAGCGAATCATAACGGACCGGTTTTTGTAGACCGGTTTACTGAAGCTTTGCATTATTACTCAAGTTTATTTGATTCCTTGGAGGGTTCGAGCTCTAACTCGAACCCAACCGGGTTGGGTTCACCGAGTAATGATTTGTTGATGTCGGAGATTTATTTGGGGAGGCAGATATGTAACGTGGTGGCTTGTGAAGGACTGGACCGGGTTGAAAGACATGAGACTTTGGGTCAGTGGAGGTCGAGAATGGGTTCAGCTGGGTTCGAACCGGTTCATTTGGGTTCAAATGCGTTTAAACAAGCTAGTACTTTGTTAGCTTTGTTTGCTGGTGGTGATGGGTATATGGTTGAGGAAAATAATGGGTGCCTTATGTTAGGGTGGCATACAAGGTCACTCATTGCTACTTCTGCTTGGAAGCTTCCACTCACTGAGTCCAAGTGA 1797 0.4424 MKRDHQESFSEGVSNNTNTNTNNKNIINFGECSSMQNTNTKQNMWREEKETNGGGMDELLAALGYKVRSSDMVDVAQKLEQLEMVMGSAQEEGINHLSSDTVHYDPTDLYSWVQTMLTELNPDSQINDPLNPSSSSSILNNTFNDDSQYDLSAIPGMAAYPPQNHNQINEIQLSNSNKRLKTTWGDESESEDIHLLPAGSPAVSPVVENTRPVVLVDTQETGVRLVHTLNACAEAIQQENLKLAEALVKHIGLLASLQTGSVRKVASYFAQALARRIYGNPEETIDSSFSEILHLHFYESSPYLKFAHFTANQAILEAFAGAGRVHVIDFGLKQGMQWPALMQALALRPGGPPTFRLTGIGPPQADNTDALQQVGWKLAQLAQTIGVQFEFRGFVCNSIADLDPDMLEIRPGEAVAVNSVFELHTMLARPGSVEKVLNTVKKINPKIVTIVEQEANHNGPVFVDRFTEALHYYSSLFDSLEGSSSNSNPTGLGSPSNDLLMSEIYLGRQICNVVACEGLDRVERHETLGQWRSRMGSAGFEPVHLGSNAFKQASTLLALFAGGDGYMVEENNGCLMLGWHTRSLIATSAWKLPLTESK* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3178 598 MobiDBLite consensus disorder prediction 1 24 - -
Mal2g3178 598 PANTHER DELLA PROTEIN GAI1-RELATED 31 592 IPR030006 GO:0003712|GO:0005634
Mal2g3178 598 SMART DELLA_2 57 130 - -
Mal2g3178 598 Coils Coil 72 92 - -
Mal2g3178 598 Gene3D - 55 120 IPR038088 -
Mal2g3178 598 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 31 592 IPR005202 -
Mal2g3178 598 Pfam Transcriptional regulator DELLA protein N terminal 57 123 IPR021914 -
Mal2g3178 598 ProSiteProfiles GRAS family profile. 216 591 IPR005202 -
Mal2g3178 598 Pfam GRAS domain family 225 591 IPR005202 -
Mal2g3178 598 MobiDBLite consensus disorder prediction 10 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3178 Mal-Chr2 45745951 45747747 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g3178 1 592 GRAS Transcription Factor Family AT2G01570 57.630 0.0 667
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mal2g3178 GRAS 8.4e-138 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3178 K14494 - gmx:100799695 844.728