Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3153 ATGGGAAGACAACCTTGTTGTGACAAAGTTGGGTTGAAGAAAGGGCCATGGACAGCTGAGGAAGATAGAAAGCTCATAAATTTCATCCTCACTAATGGCCAATGTTGCTGGAGAGCTGTTCCTAAGCTAGCAGGGTTGTTAAGGTGTGGAAAAAGTTGCAGACTGAGATGGACAAACTACCTAAGGCCTGACCTAAAGAGAGGACTTTTATCAGAAGATGAAGAGAAAATGGTTATTGATCTCCATGCTCAACTTGGCAACAGATGGTCAAAAATTGCTTCTCATCTACCTGGAAGAACCGATAATGAGATTAAGAATCATTGGAATACTCACATAAAGAAAAAGCTCAAGAAAATGGGAATTGATCCAGTTACACACAAGTTACTCTCTAATGCAACAATTGAGCAAACTCAAACACAATCTGAAAAACAACATCAACAACAATCTTCTTCACCTATTGAATTGGAACACAATGTTGAATTTGAGAATGACAAAAACAAGGAACCACAGAAACCAGAATCTTCATTTGATTCATCAACCTTAACTGAAGCTAAAGAACAAGACCAAATTATGACACCATTTTTTGACTCAACAATGGAACTAATGAATGAGTTATTCACAGAAGATGTTCCAATAATATTGCAAGATGAAATTCTAGTTCCATGTGTTCCTTCATCTTCATCAACCACAACATCATCATCATCATCTTCAAATTCAAATTCATCTAACTTCCTTGAAGACTTGTTTCTCCCTGATTTTGATTGGTCACATGATAATAATATTGAAAATAATAACTATAATGGAAATAGTAATAATAATAATAATAATATTAATATGACATTATGGGATGAAGACTTTATTAGAAGTTGGGATTTTGTGATCAATGATGATGATGATGGTGACAGAAAGCAAGTGTTTGATGCTCCTCAAAATCAGTATCCAAGAGTGGTCATGGATTCAGAATCATGGGCCTATGGATTGTTTTGA 987 0.3526 MGRQPCCDKVGLKKGPWTAEEDRKLINFILTNGQCCWRAVPKLAGLLRCGKSCRLRWTNYLRPDLKRGLLSEDEEKMVIDLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLKKMGIDPVTHKLLSNATIEQTQTQSEKQHQQQSSSPIELEHNVEFENDKNKEPQKPESSFDSSTLTEAKEQDQIMTPFFDSTMELMNELFTEDVPIILQDEILVPCVPSSSSTTTSSSSSSNSNSSNFLEDLFLPDFDWSHDNNIENNNYNGNSNNNNNNINMTLWDEDFIRSWDFVINDDDDGDRKQVFDAPQNQYPRVVMDSESWAYGLF* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3153 328 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mal2g3153 328 MobiDBLite consensus disorder prediction 173 187 - -
Mal2g3153 328 PANTHER MYB TRANSCRIPTION FACTOR 1 301 - -
Mal2g3153 328 Gene3D - 11 67 - -
Mal2g3153 328 SMART sant 13 63 IPR001005 -
Mal2g3153 328 SMART sant 66 114 IPR001005 -
Mal2g3153 328 CDD SANT 16 61 IPR001005 -
Mal2g3153 328 MobiDBLite consensus disorder prediction 162 187 - -
Mal2g3153 328 Gene3D - 71 116 - -
Mal2g3153 328 CDD SANT 71 112 IPR001005 -
Mal2g3153 328 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mal2g3153 328 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mal2g3153 328 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mal2g3153 328 Pfam Myb-like DNA-binding domain 71 111 IPR001005 -
Mal2g3153 328 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mal2g3153 328 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 301 - -
Mal2g3153 328 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3153 Mal-Chr2 44936869 44939147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g3153 1 297 MYB Transcription Factor Family AT1G66230 57.912 4.57e-98 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal2g3153 Myb_DNA-binding 3.3e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3153 K09422 - gmx:100803624 474.937