Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3141 ATGGAAGGTCACCGGGAAAGAACTTTTTATGAAGAAATGTCAGCTACGGAGAGTAGGCGAGAGAAGCTAGCAGGATTGTCTCTTGACGACATCTTAGCGAATCAACAAAGAGCCGGCTCTACTCCGCCACACCAACCACCCCCTAAAAGTCGAACCCTCATAGACGTCGTCAAAGAAGACGAAACCAACAAAAAAGATCGCAGATACTGGAAAACCTTCAAGGAAAAACTTAGACTCAAGCGTGCTGGCTCTACTTGGACATCATCAATTCACATTCCAACGTCAGATATCCCTATCCAAAATCCGAATAGCAGAAGCTTTTCACAATTCGGGCGTCGCAACTCAGTCAGAGTCCAAACTCAGCACAACTCAGACATGTTAGCTCAGTCCATGACTAACCAAGTGGATGACCTCGATCCGTCAGATGAATCCAACGCTGCAGCTACCAGACCACAATTCACTCGTCGAACCTCAACTCGTTTCACAGGAGATCTCCCTGAAAATTCCACCGGTAGTAGAAATCTCAGACCACAACTCTCACGCACGAATTCCACCAATGTGCCCTTCGACGATGATGAGTCAGACGATGATACCAATCACCCAAAAACGGGGAGGGCATTATCAGCGAGAGAGGCAGTGGTGGCACAAGAAGCAGCAGAAGCTGCGGCAGAGGTGGAGGCTGCAACAGGAGCTCCGATGATGTCATTGATGGATTTGTTAGGGGAGACCGATAGAGAGATGGGGTTGGAAGGGTCAAGGTATATATTAAGTGATGATGAAGATTTTTCTGATGGTGATTATGATGAAGATGAAGATGGAGAAAGTGCATTGGAACACAGTTGTTGTATTTGTATGGTGAAGCATAAGGGTGCTGCCTTGGCAGCTTGCGGCCATAGTTTTTGTAGGATGTGTTCAAGGGAGCTTATGGTTGCTAAGGGAAATTGTCCACTTTGTAATAATTTCATTTCAGAGATTCTTGATATTTTTTAA 990 0.4576 MEGHRERTFYEEMSATESRREKLAGLSLDDILANQQRAGSTPPHQPPPKSRTLIDVVKEDETNKKDRRYWKTFKEKLRLKRAGSTWTSSIHIPTSDIPIQNPNSRSFSQFGRRNSVRVQTQHNSDMLAQSMTNQVDDLDPSDESNAAATRPQFTRRTSTRFTGDLPENSTGSRNLRPQLSRTNSTNVPFDDDESDDDTNHPKTGRALSAREAVVAQEAAEAAAEVEAATGAPMMSLMDLLGETDREMGLEGSRYILSDDEDFSDGDYDEDEDGESALEHSCCICMVKHKGAALAACGHSFCRMCSRELMVAKGNCPLCNNFISEILDIF* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3141 329 MobiDBLite consensus disorder prediction 135 203 - -
Mal2g3141 329 MobiDBLite consensus disorder prediction 135 187 - -
Mal2g3141 329 MobiDBLite consensus disorder prediction 1 51 - -
Mal2g3141 329 CDD RING-HC 281 318 - -
Mal2g3141 329 SUPERFAMILY RING/U-box 280 325 - -
Mal2g3141 329 MobiDBLite consensus disorder prediction 1 26 - -
Mal2g3141 329 PANTHER OS01G0917900 PROTEIN 5 329 - -
Mal2g3141 329 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 258 329 IPR013083 -
Mal2g3141 329 PANTHER OS01G0917900 PROTEIN 5 329 - -
Mal2g3141 329 SMART ring_2 281 318 IPR001841 -
Mal2g3141 329 Pfam Zinc finger, C3HC4 type (RING finger) 279 324 - -
Mal2g3141 329 ProSiteProfiles Zinc finger RING-type profile. 281 319 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3141 Mal-Chr2 44721467 44723491 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g3141 13 329 C3H Transcription Factor Family AT3G07120 38.196 3.90e-54 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3141 - - gmx:100795449 386.726