Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3135 ATGGTTTTGTCATGGACAAGAAGAAACATGTTCCGCCGTGCCGGCAAGAAAGAACAACTTTCCGGCAGCGATTTGACGGTGGAGGAGATAACAATCCCAACCCATTTCCGATGTCCGGTGAGTCTAGACTTGATGAAAGATCCAGTAACTCTACCAACAGGAATCACCTATGACAGAAGTAGCATCGAGAAATGGATTGAATCCGGTAACAAAACTTGCCCAGTTACAAATCAGAAGTTAACAACCTTTGAAATCACACCGAATCACACAATTCGTAAAATGATTCAGAGTTGGTGTGTTGAGAATAGCTCTTATGGGATTGAGAGAATTCCAACACCTCGTATACCTGTTTCAGGGTACGAGGTTAATGAGCTTTGTACGAGGTTGTTGTCGGGTTGTAGAAATTTGGATGAGAAAAAGTGTGTTGAGTTTGTTGGAAAGATTAAGGTTTGGTGGAGAGAGAGTGAGAGGAATAAGAGGGTTATAATTGGAAATGGAGTTTGTTCTGTTTTAGCTACGGTTTTTGATTCTTTTTCATGTGTTTCTTTTGAGAAGCATGTTGTTGTTATGGAGGAGATTTTGGAGATTTTAACATGGATGATGGTTATAACCCCTTTTGGCGAATCAAGATCCAAATTGTGTTCATCATCTTTGAATTGTTTGGTTTGGTTTTTAGATGGTAAAGATTTAGGAGCAAGACAAAATGCTGTTTTGTTGCTTAAGGAAATGAATGTTGAGGAATTAGCAAAAGTTGAAGGAGTTGTTGAAGGTTTGGTTAAGATTGTTAAGGAACCAATTGGGTCAAGTGCAACAAAAGCATGTTTGACCACAATTTTCAAGTTGGTTTCATCGGCGAAAAATAGAGTTGAAATTGGTGAAAAGTTTGTTGAGTTGGGTTTGGTTTCATTTTTGCTTGAAACAATTGTTGATGGAGAAAAAGGGATATGTGAGAAAGCACTTGGTGTGTTGGATTGTTTATGTGATTGCAAGAAAGGGAAAGAGGTTGTTAAAATGAATGCTTTAACTTTGCCTCTTGTGATTAAGAAAATCTTGAGGGTTTCTCCTTTAGCATCTAGTTTTGCTGTTGGGATTGTTAGGAAGATGTTATGTGAGAAGAAGGAAGAAGGTGTTTTGATTGAAGCTATTCAACTTGGTGCTTTTCAGAAACTTTTGGTTATGTTGCAAGTTGGGTGTGAGGAGAAGACAAAGGAGAATACTACTGAGTTGTTGAAATTGTTGAATGGTTATAGAAGCAAAGCTGAATGTGTTGACTCTTCATTAGATTTCAAGTATCTCAAGAACTAA 1305 0.3778 MVLSWTRRNMFRRAGKKEQLSGSDLTVEEITIPTHFRCPVSLDLMKDPVTLPTGITYDRSSIEKWIESGNKTCPVTNQKLTTFEITPNHTIRKMIQSWCVENSSYGIERIPTPRIPVSGYEVNELCTRLLSGCRNLDEKKCVEFVGKIKVWWRESERNKRVIIGNGVCSVLATVFDSFSCVSFEKHVVVMEEILEILTWMMVITPFGESRSKLCSSSLNCLVWFLDGKDLGARQNAVLLLKEMNVEELAKVEGVVEGLVKIVKEPIGSSATKACLTTIFKLVSSAKNRVEIGEKFVELGLVSFLLETIVDGEKGICEKALGVLDCLCDCKKGKEVVKMNALTLPLVIKKILRVSPLASSFAVGIVRKMLCEKKEEGVLIEAIQLGAFQKLLVMLQVGCEEKTKENTTELLKLLNGYRSKAECVDSSLDFKYLKN* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3135 434 ProSiteProfiles U-box domain profile. 31 105 IPR003613 GO:0004842|GO:0016567
Mal2g3135 434 Pfam U-box domain 32 103 IPR003613 GO:0004842|GO:0016567
Mal2g3135 434 SMART Ubox_2 35 98 IPR003613 GO:0004842|GO:0016567
Mal2g3135 434 SUPERFAMILY ARM repeat 149 412 IPR016024 -
Mal2g3135 434 Gene3D - 120 418 IPR011989 -
Mal2g3135 434 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 12 109 IPR013083 -
Mal2g3135 434 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 21 8 434 - -
Mal2g3135 434 CDD RING-Ubox_PUB 36 78 IPR045210 -
Mal2g3135 434 PANTHER WDSAM1 PROTEIN 8 434 IPR045185 GO:0061630
Mal2g3135 434 SUPERFAMILY RING/U-box 22 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3135 Mal-Chr2 44652532 44653836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g3135 29 433 U-box Gene Family AT5G37490 48.434 7.23e-115 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3135 - - gmx:548086 595.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g3135 2 44652532 44653836 Mal8g1433 8 27190805 27192133 PCT