Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3111 ATGTCACAAGGTGTATCAATCTCTATTTACATTATTACTATTCAACTAATTATTCTACTCATTTCACCAGCTACTTCTCATTATTCTTCACCATCACCACCAGCCACACCATTCACCGAATCTCCCCTCAACCCTCCCTCTCCCACCACCTCCGAATGGCTCTCCGCCCACGCCACTTACTACTCCGTCTCTGATGACACTAGAGACGGAGTAGACGGAGCATGCGGCTACAGTGATACTCATAGAGACGGTTATGGGATCACTGGAGCTGCCGCTCTCAGTGAGACTCTCTTTGTGCGTGGACAGATCTGTGGTGCGTGCTTTGAGCTACGTTGTCTTGAAGAGGATGTTCCGTTTGATAAACGGTGGTGTGTCTCTGGTAGTTCTGTTGTTGTTACTGCTACAAATTTTTGTGCTCCGAATTATGGGTTTGAAGCAGAGAGTGATGGTGGATATTGTAATCCTCCTAAGCAGCATTTTGTGCTTCCGGTTGAAGCTTTTGAGAAGATTGCTATTTGGAAAGGGGGAAATATGCCTGTGCAGTATCGAAGGATAAAGTGCACAAGGGAAGGGGGAATGCGGTTTACAATTGCAGGTTCTGGAATCTTCAATTCAGTGCTGATCAGTAATGTAGCTGGCATAGGAGACATTGTTGGTGTGAAAGTTAAGGGCTCAAGAACTGGTTGGATTCCTATGGGTCGAAATTGGGGTCAAAATTGGCATGTAAATGCATTGCTACAAAACCAACCTCTTTCATTTGAGGTCACTAGTAGTGATGGTGTGACTATTACATCTTACAATGTAGCTCCTAAGAATTGGACCTTTGGACAAACCTTTGAAGGCAAGCAATTTGAGTCTTAA 861 0.4448 MSQGVSISIYIITIQLIILLISPATSHYSSPSPPATPFTESPLNPPSPTTSEWLSAHATYYSVSDDTRDGVDGACGYSDTHRDGYGITGAAALSETLFVRGQICGACFELRCLEEDVPFDKRWCVSGSSVVVTATNFCAPNYGFEAESDGGYCNPPKQHFVLPVEAFEKIAIWKGGNMPVQYRRIKCTREGGMRFTIAGSGIFNSVLISNVAGIGDIVGVKVKGSRTGWIPMGRNWGQNWHVNALLQNQPLSFEVTSSDGVTITSYNVAPKNWTFGQTFEGKQFES* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3111 286 SUPERFAMILY PHL pollen allergen 189 281 IPR036749 -
Mal2g3111 286 PRINTS Expansin signature 167 180 IPR002963 GO:0009664
Mal2g3111 286 PRINTS Expansin signature 84 98 IPR002963 GO:0009664
Mal2g3111 286 PRINTS Expansin signature 203 224 IPR002963 GO:0009664
Mal2g3111 286 PRINTS Expansin signature 267 283 IPR002963 GO:0009664
Mal2g3111 286 PRINTS Expansin signature 191 203 IPR002963 GO:0009664
Mal2g3111 286 PRINTS Expansin signature 238 259 IPR002963 GO:0009664
Mal2g3111 286 PRINTS Expansin signature 150 167 IPR002963 GO:0009664
Mal2g3111 286 PANTHER EXPANSIN-A13 23 285 - -
Mal2g3111 286 SUPERFAMILY Barwin-like endoglucanases 48 210 IPR036908 -
Mal2g3111 286 PRINTS Expansin/Lol pI family signature 52 67 IPR007118 GO:0005576
Mal2g3111 286 PRINTS Expansin/Lol pI family signature 71 89 IPR007118 GO:0005576
Mal2g3111 286 PRINTS Expansin/Lol pI family signature 94 112 IPR007118 GO:0005576
Mal2g3111 286 PRINTS Expansin/Lol pI family signature 175 191 IPR007118 GO:0005576
Mal2g3111 286 PRINTS Expansin/Lol pI family signature 267 281 IPR007118 GO:0005576
Mal2g3111 286 PRINTS Expansin/Lol pI family signature 229 243 IPR007118 GO:0005576
Mal2g3111 286 SMART dpbb_1 90 182 IPR007112 -
Mal2g3111 286 MobiDBLite consensus disorder prediction 31 50 - -
Mal2g3111 286 Pfam Expansin C-terminal domain 193 270 IPR007117 -
Mal2g3111 286 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 202 281 IPR007117 -
Mal2g3111 286 PANTHER EXPANSIN-A15 23 285 IPR002963 GO:0009664
Mal2g3111 286 Gene3D - 39 188 IPR036908 -
Mal2g3111 286 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 72 192 IPR007112 -
Mal2g3111 286 Pfam Lytic transglycolase 91 182 IPR009009 -
Mal2g3111 286 Gene3D - 193 284 IPR036749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3111 Mal-Chr2 44135691 44138833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g3111 52 286 Expansin Gene Family AT3G03220 69.362 8.74e-121 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3111 - - mtr:MTR_3g064510 523.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g3111 2 44135691 44138833 Mal8g1467 8 28057498 28059954 PCT