Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3110 ATGATTTCTGGTCTAGATCAAGATGGATTAACTTGTTCCGGTGTTAGCCCTGCAGTACGAAATGTAGTTTTTATGAATTCTGGATCACATCCTGTTACTCATATTCAACTCAGCGATCAGTTATCTTGCGCGAATGACTATGCTCTTAAGAAGTTCCTTGAAGCCTTAAAGCTGTATGGCCGGGCCTGGCGACACATTGAAGAACACGTTGGTACAAAGACTGCGGTCCAGATTCGAAGTCATGCTCAGAAGTTTTTCTCTAAGGTTCTTCGCGACACGAGTGCAAGCATTACAAAAACTAAGGAATCGATTGAAATTCCTCCTCCTAGACCGAAACGAAAGCCTATGCACCCTTACCCTCGCAAGCTAGTCGAGACGGCCAGTAGTAAAGAAATTTCAATCCCGAAAAAGACAATGAATTCTAATTCTCTGAAGACATCAGATTTTGATCAAGAAAACCAATCTCCCAAATCAGTATTATCTACACATGGTTCCGAAAGCCTTGGTTCGTCCGATTCAGATGCACAAAACGGAAGTTTATCGCCGATATCATCGATTAGTTGTGTCCAAGCAAGTGTTTTTAGACCTGATGAATTCAAAACACCATCAGAGGAAGAAGCTAAGCTAGATGTTGATTCAGTTCCTGACGAGAAACCTCTTATGAAACTCGAGATTCTCCCCGATGAAAGTGTTTCTGCAAAAGAAAGCATAGCAGAAGAATTGTCTCGTCGAACTCTTAAACTTTTTGGGACGACTCTATTTGTAAAAGATATTTGCAAACCATCTTCTCCAACAATTGAGGCATGCAAACCAATACCTCATGACATACATGTTATAAAGGGCGAAGGAAAATTGGAACTTCTTGGCAAAAGTACACTATGTGAAACATCAGCCATATCTCAGTTAAGAGTAAGAGTGAGGCACGAAACTTGTGGGAAAGGGTTTGTGCCATATAAAAGGTGCACGTCAAAAAAAGAAAACCAGTCTTCATCTGCAACAGCTGATGAAAGATAA 1014 0.4083 MISGLDQDGLTCSGVSPAVRNVVFMNSGSHPVTHIQLSDQLSCANDYALKKFLEALKLYGRAWRHIEEHVGTKTAVQIRSHAQKFFSKVLRDTSASITKTKESIEIPPPRPKRKPMHPYPRKLVETASSKEISIPKKTMNSNSLKTSDFDQENQSPKSVLSTHGSESLGSSDSDAQNGSLSPISSISCVQASVFRPDEFKTPSEEEAKLDVDSVPDEKPLMKLEILPDESVSAKESIAEELSRRTLKLFGTTLFVKDICKPSSPTIEACKPIPHDIHVIKGEGKLELLGKSTLCETSAISQLRVRVRHETCGKGFVPYKRCTSKKENQSSSATADER* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3110 337 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 51 90 IPR017930 -
Mal2g3110 337 Pfam Myb-like DNA-binding domain 50 84 IPR001005 -
Mal2g3110 337 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 51 88 IPR006447 GO:0003677
Mal2g3110 337 PANTHER SWI/SNF COMPLEX-RELATED 50 269 - -
Mal2g3110 337 MobiDBLite consensus disorder prediction 131 181 - -
Mal2g3110 337 MobiDBLite consensus disorder prediction 99 181 - -
Mal2g3110 337 SUPERFAMILY Homeodomain-like 50 88 IPR009057 -
Mal2g3110 337 Gene3D - 49 89 - -
Mal2g3110 337 PANTHER PROTEIN REVEILLE 7-RELATED 50 269 - -
Mal2g3110 337 CDD SANT 50 86 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3110 Mal-Chr2 44130199 44132170 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal2g3110 Myb_DNA-binding 1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3110 - - gmx:780539 380.948