Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3089 ATGCGACCACAACACAACCTCCTAACCTTAACAATTACCTTGTTATGTTCATGGAGCTTAACAACAAAAGCTGATCCTCAAACACGTTTAATCAACAAAGGTTGTAGCCAATACAACGCAACAAACTTATCCAATTTCTACCAAAATCTAAACGCAACTTTATCAGACTTGAAATCACAAATAGGGAATGATAGTAAGCATTTTGCCACGGCACAATCAGCTAGAGGAGCAAATCCTGTTTATGCTTTGTTTCAGTGTAGGAATTATCTCTCTAATTCTGATTGTGCCGCATGCCTCGCCGTCGCCGCCGCACAAATTCGGAATTGCTCCGCTGGTTCCAACGGTGCTCGTGTTATTTATGATGGTTGCTTCCTTAGGTATGAGAGCAATGGATTCTTCGACCAAACAACTCTACCTGGAAACAGTATGATATGTGGAAGCCAGGCAGCAAATGGAGCTGCTGCTTTTAATGCAGCTGCACAGCAAGTGCTTGTGGATCTACAAACAGCAACACCCAAAATTCCTGGTTTCTTTGCAGCTACTAAGACACCAGTTACTGGAACTGGAAATGCAATCTATGCCATTGCACAATGTGCTGAAACAGTCACTCAAAGTGGTTGTTTGGATTGCTTGACAGTTGGATTCAACAACATACAGAGTTGTTTTCCTAATACAGATGGTAGAGCATTTGATGCTGGTTGTTTTATGAGATACTCGGAGAAATCATTTTTTGGTGATAACCAGACCATTGATATCACACCCTTCTTAAAAAAAGGAGGTTCAAGTAAGAAATGGGCCATTATTGGTGGGGTTGTGGGAGGTGTAGCCCTTGTTTTGATCCTCCTTGCAGTTTTTGTTTGGTTTAGGCTCAACAAGAAACCCAAGAGAATCCCTAGAGGTGACATATTGGGAGCAACTGAGTTGAAAGGTCCAGTTACTTACAGATATAAAGATTTGAAGTCTGCAACAAAAAATTTTAATGATGAAAATAAACTAGGAGAAGGAGGTTTTGGAGATGTATACAAGGGCACTCTGAAAAATGGTAAAGTAGTTGCTGTCAAGAAACTGATTCTAGGCAACTCCGGCAAGATGGATGAACAATTTGAAAGTGAAGTGAAGCTCATAAGTAATGTTCATCATAGGAATCTAGTTCGTCTTCTCGGATGTTGTAGTAAAGGCCAAGAGAGAATCCTTGTTTATGAATACATGGCAAACAGCAGCCTTGACAGATTCTTATTTGGTGAAAATAAGGGTTCCCTCAATTGGATTCAAAGGTATGATATAATTTTAGGCACAGCAAGAGGTCTATCTTATCTGCATGAAGATTTCCACGTTTGCATCATACATAGGGATATAAAGACTAGCAATATCCTTTTAGATGATGATCTTCAGCCTAGAATTGCTGATTTTGGATTGGCAAGACTTCTACCAGAAGATCAATCTCATGTTAGCACAAGATTTGCAGGAACATTGGGATACACTGCACCAGAATATGCAATTCATGGTCAATTATCAGTGAAGGCTGATACCTACAGTTTTGGTGTTGTAGTCCTAGAAATCATAAGTGGCCAAAAGAGTAGTGAGTTGAGGGATGATGTTGATGGTGAATTCCTCCTTCAAAGGGCATGGAAACTATATGAGGAAGATAGACACTTGGAGTTAGTTGACAAGACATTGAACCCTAGTGACTATAATGCAGATGAAGTGAAGAAAGTTATAGAAATTGCTTTGCTTTGCACTCAAGCAACAGCTGCTACAAGGCCAACTATGTCTGAAATAGTAGTTCTACTCAAAAGCAAGAACTTTGTGGAGCATATGAAACCAACCATGCCTGTCTTTGTTAACTCTAACTTGAGGCCTCAGACAGACACATCTACATCAACTGCTTCCTCTGCATCTAATGCTACTGCTGCCACTTCTATACTATCAGCTAGATGA 1938 0.4014 MRPQHNLLTLTITLLCSWSLTTKADPQTRLINKGCSQYNATNLSNFYQNLNATLSDLKSQIGNDSKHFATAQSARGANPVYALFQCRNYLSNSDCAACLAVAAAQIRNCSAGSNGARVIYDGCFLRYESNGFFDQTTLPGNSMICGSQAANGAAAFNAAAQQVLVDLQTATPKIPGFFAATKTPVTGTGNAIYAIAQCAETVTQSGCLDCLTVGFNNIQSCFPNTDGRAFDAGCFMRYSEKSFFGDNQTIDITPFLKKGGSSKKWAIIGGVVGGVALVLILLAVFVWFRLNKKPKRIPRGDILGATELKGPVTYRYKDLKSATKNFNDENKLGEGGFGDVYKGTLKNGKVVAVKKLILGNSGKMDEQFESEVKLISNVHHRNLVRLLGCCSKGQERILVYEYMANSSLDRFLFGENKGSLNWIQRYDIILGTARGLSYLHEDFHVCIIHRDIKTSNILLDDDLQPRIADFGLARLLPEDQSHVSTRFAGTLGYTAPEYAIHGQLSVKADTYSFGVVVLEIISGQKSSELRDDVDGEFLLQRAWKLYEEDRHLELVDKTLNPSDYNADEVKKVIEIALLCTQATAATRPTMSEIVVLLKSKNFVEHMKPTMPVFVNSNLRPQTDTSTSTASSASNATAATSILSAR* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3089 645 ProSitePatterns Protein kinases ATP-binding region signature. 332 355 IPR017441 GO:0005524
Mal2g3089 645 Gene3D - 27 132 IPR038408 -
Mal2g3089 645 Gene3D - 141 243 IPR038408 -
Mal2g3089 645 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 19 642 - -
Mal2g3089 645 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Mal2g3089 645 SUPERFAMILY Protein kinase-like (PK-like) 310 624 IPR011009 -
Mal2g3089 645 Pfam Protein tyrosine and serine/threonine kinase 329 596 IPR001245 GO:0004672|GO:0006468
Mal2g3089 645 ProSiteProfiles Gnk2-homologous domain profile. 138 243 IPR002902 -
Mal2g3089 645 Gene3D Transferase(Phosphotransferase) domain 1 403 610 - -
Mal2g3089 645 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 19 642 - -
Mal2g3089 645 ProSiteProfiles Protein kinase domain profile. 326 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g3089 645 CDD STKc_IRAK 332 598 - -
Mal2g3089 645 Gene3D Phosphorylase Kinase; domain 1 301 402 - -
Mal2g3089 645 ProSiteProfiles Gnk2-homologous domain profile. 28 132 IPR002902 -
Mal2g3089 645 SMART serkin_6 326 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g3089 645 Pfam Salt stress response/antifungal 35 129 IPR002902 -
Mal2g3089 645 Pfam Salt stress response/antifungal 149 240 IPR002902 -
Mal2g3089 645 MobiDBLite consensus disorder prediction 614 645 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3089 Mal-Chr2 43758561 43764308 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g3089 7 645 Receptor kinase-like Gene Family AT1G70520 36.826 1.78e-127 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal2g3089 PK_Tyr_Ser-Thr 1.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3089 - - gmx:100813585 1001.89