Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3086 ATGAAGCTTTCAACATCAGGGTTGGGACAACAGGGACATGAAGGAGGAGGAGGGGAGAAGAAGTGTCTGAATTCTGAGCTATGGCATGCATGTGCGGGGCCCTTAGTGTCCCTACCAACTGCAGGAACTCGCGTGGTTTACTTCCCTCAGGGTCATAGTGAGCAGGTATCTGCCACAACTAACCGAGAAATCGATGGGCATATACCGAATTACCCTAGTTTGCCACCTCAGTTGGTTTGCCAACTTCACAATGTCACAATGCATGCAGATGTTGAAACAGACGAAGTATATGCTCAAATGACACTGCAGCCGTTGACTCCGGAAGAGCAAAAGGATACATTTCTTCCTATGGAATTGGGCATTCCAAGTAAGCAGCCCTCGAACTATTTTTGCAAGACTTTAACAGCCAGTGACACTAGCACACATGGAGGATTCTCTGTTCCTCGTCGCGCAGCTGAGAAAGTTTTCCCTCCATTGGATTTCTCACAGCAACCACCGGCACAAGAACTAATTGCTAGGGATCTCCATGACGTTGAATGGAAGTTTCGACATATTTTTCGGGGACAACCAAAACGACACCTTCTTACAACAGGCTGGAGTATATTTGTTAGTGCTAAGAGACTTGTTGCTGGAGATTCCGTGCTTTTCATATGGAATGAGAAGAATCAGCTTCTTTTGGGAATACGTCGAGCCAATCGACCACAGACTGTAATGCCATCATCAGTTTTGTCCAGTGACAGTATGCACATTGGACTTCTTGCAGCCGCTGCTCATGCTTCAGCAACTAATAGCTGTTTTACCGTCTTCTATAATCCAAGGGCTAGTCCATCCGAGTTTGTCATACCACTTTCAAAATATATCAAAGCCGTGTACCATACACGTATTTCTGTTGGTATGCGCTTCAGGATGCTCTTTGAGACTGAAGAGTCAAGTGTCCGCAGGTACATGGGTACAATAACTGGCATAAGTGATCTGGATGCTGTTCGTTGGCCGAATTCTCACTGGCGTTCTGTCAAGGTTGGTTGGGATGAATCAACAGCAGGAGAGAGACAGCCACGGGTGTCATTATGGGAAATTGAGCCTTTAACAACATTTCCAATGTATCCGTCACTGTTTCCCCTCAGATTGAAACGTCCATGGCATCCTGGCACCTCATCTTTGCTCGATGGCAGAGATGATGCAACAAATGCTCTTATGTGGATGAGAGGTGGACCTGCAGACCAAGGTCTCAATTCCCTAAATTTTCAAGGTGCTGGTATGTTGCCCTGGATGCAGCAGAGACTTGATCCAACTTTACTCGGAAATGATCAGAATCAACAATACCAAGCCATGTTGGCAGCAGCTGGAATGCAGAACATGGGTAGTGGATATCTTATGAGGCCACAAATGGTGAATTTTCAACAACAGCCTACCAATTACCTTCAACCAGGAAACAATAATTCACCTTTGCAACTTCAGCAGCCGCAATCAATTCAACAATCGATGTCCTCTAATATGATGCAGCCACAACAAGCCCAAGTAATGACAGAAAACCTGTCTCAACACCTCCTTCAGAAACCAAATAATAATCAAGAACTCCAAGCTCAACAACAGCAACATGCTTATCAGGATACACTTCTTGTTCAAAATGATCAGCTCCATCAGAGACAACAACACTCCAATGTGCCGTCACCGTCGTATTCAAAACCAGATTTCCTGGATTCAAGCATTAAGTTTCCTGCTTCCGTTCCCTCGGGACAAAACATGCTTGGTTCGCTTTGCCCTGAAGGAACTGGGAATCTCTTGAATCTATCGAGTCTAACGAGAAGCGGTCAGTCATTGATGACTGAACAGTTACCGCAACAATCATGGACTCCAAAGTATGGCAATATGCAGGTCAATGCCTTTGGCAGCACAATGTCACATGCACAATATTCTGTAAAAGATTCAGCTATGGTGCCTCCACATTGTGATTCAGATGCCCAAAATCATACTCTCTCGGGTGTCAATATCGATTCATCTGGTCTTCTACTCCCCACCACTGTCCCGAATTACAGTGCTTCATCAGCTGACACTGGTGCATCAACACAATTAGGGGAGTCTGGATTCCAGGGTTCTCTATATGCCTGCATGCAAGATTCATCTTCGTTTTTGCAAAATGCAGAGCAAATCGACCCACAAAACCAGAACCCAATATTTGTGAAGGTTTACAAATCGGGATCGGTTGGGCGTTCACTTGACATCTCTCGGTTCAGCTGCTATCGTGAGCTGCGAGAGGAGTTGGGTCAAATGTTTGGAATTGAGGGGAAGTTAGAAGACCCTCTTAGATCAGGCTGGCAGCTTGTGTTCGTCGACCGGGAGAATGATGTGCTTCTCCTTGGCGACGATCCGTGGGAATCATTCGTGAGTAACGTTTGGTATATCAAAATACTTTCACCGGAAGATATTCAGAAGATGGGAGAACAAGCAGTAGAAACGCTTGCGCTAGGTTCAGGACAAAGGCTTAACGGCAGTGGTGAATCACACCACATTGTTTCTGGACAACCACCATCAATTGGCTCACTTGAATACTGA 2553 0.4555 MKLSTSGLGQQGHEGGGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREIDGHIPNYPSLPPQLVCQLHNVTMHADVETDEVYAQMTLQPLTPEEQKDTFLPMELGIPSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSIFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHASATNSCFTVFYNPRASPSEFVIPLSKYIKAVYHTRISVGMRFRMLFETEESSVRRYMGTITGISDLDAVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHPGTSSLLDGRDDATNALMWMRGGPADQGLNSLNFQGAGMLPWMQQRLDPTLLGNDQNQQYQAMLAAAGMQNMGSGYLMRPQMVNFQQQPTNYLQPGNNNSPLQLQQPQSIQQSMSSNMMQPQQAQVMTENLSQHLLQKPNNNQELQAQQQQHAYQDTLLVQNDQLHQRQQHSNVPSPSYSKPDFLDSSIKFPASVPSGQNMLGSLCPEGTGNLLNLSSLTRSGQSLMTEQLPQQSWTPKYGNMQVNAFGSTMSHAQYSVKDSAMVPPHCDSDAQNHTLSGVNIDSSGLLLPTTVPNYSASSADTGASTQLGESGFQGSLYACMQDSSSFLQNAEQIDPQNQNPIFVKVYKSGSVGRSLDISRFSCYRELREELGQMFGIEGKLEDPLRSGWQLVFVDRENDVLLLGDDPWESFVSNVWYIKILSPEDIQKMGEQAVETLALGSGQRLNGSGESHHIVSGQPPSIGSLEY* 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3086 850 CDD B3_DNA 129 230 IPR003340 GO:0003677
Mal2g3086 850 PANTHER AUXIN RESPONSE FACTOR 1 835 - -
Mal2g3086 850 MobiDBLite consensus disorder prediction 827 850 - -
Mal2g3086 850 Pfam B3 DNA binding domain 130 231 IPR003340 GO:0003677
Mal2g3086 850 SUPERFAMILY CAD & PB1 domains 720 798 - -
Mal2g3086 850 MobiDBLite consensus disorder prediction 470 509 - -
Mal2g3086 850 MobiDBLite consensus disorder prediction 827 841 - -
Mal2g3086 850 Gene3D - 720 813 - -
Mal2g3086 850 Pfam Auxin response factor 256 339 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mal2g3086 850 ProSiteProfiles B3 DNA-binding domain profile. 130 232 IPR003340 GO:0003677
Mal2g3086 850 Pfam AUX/IAA family 715 808 IPR033389 -
Mal2g3086 850 Gene3D - 294 366 - -
Mal2g3086 850 SUPERFAMILY DNA-binding pseudobarrel domain 114 259 IPR015300 -
Mal2g3086 850 Gene3D - 128 231 IPR015300 -
Mal2g3086 850 ProSiteProfiles PB1 domain profile. 724 808 IPR000270 GO:0005515
Mal2g3086 850 SMART B3_2 130 232 IPR003340 GO:0003677
Mal2g3086 850 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 835 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3086 Mal-Chr2 43728798 43736495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g3086 100 816 B3 DNA Binding Superfamily AT5G37020 67.400 0.0 898
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mal2g3086 AUX_IAA 1.8e-07 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3086 - - gmx:100784373 1420.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g3086 2 43728798 43736495 Mal8g1509 8 29097263 29106057 PCT