Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3072 ATGTTTATTTATAGGAAGTTAATTTTGGAGATGGATGACAATGAAGTTGATTTAGCTACACATACAGAAGAGTTCAATGAGCTAGAAAACAAGTTGGAGGAATGGATTCCACAGTGCGATGTTGAACTGAAACCTGTGATTGGTAAGTTCTTTGATACTTTACTAGAAGCGGGTGATTTTTATAAAAACTATGCACATGCTGTTGGTTTTAGTGTGCGTAATTCAACTGAAACAAAAGATACAAATGGTGTCAGATGGAAGTATTTTCTTTGCTCAAAAGAGGGTTTTAAAATGGAAAAAAAGGTAGACGAGCATAAGTTGCTTATTAGTGAAGATAGTTTGCCTAAAGGTAGAAAAAGAAAATTGACCCGGGAGGGATGTAATGCAAGAATTGTTTTCAGGAGAAATGATGAGGGTAAGTTTGAAGTCTCAAAATTTTATGAAGGTCATTCACACACACTTGTCACACCTAGAAAGAAACAGTTGTTAAGATCGGCAAGGAGTGTCAACAGTGTTCATAAGAATTTATTATTTGCTTGCAATAGAGCTAATGTGGGGACTTCAAAAGGTTATCAAATATTGAAGGAGCAGGTTGGGAGTTATGAAGATATAGGATGCACACAAAGAGACTTTCAAAATTTTTCAAGGAATATGAAAGAATTGATCAAAGATTCTGATGCATATATGTTCATTGATAATTTTAAAAGAAAACATGAGATGAACAATTCTTTTTTCTATGATTATCAATCTGATAATGATGGGAAGTTGAAATATGTGTTTTGGGCCGATGGCATTTCTCGAAAAAATTACTCTTTGTTTGGAGATGTAGTTTCATTTGATACTACATACAGTACAAATAAGTATCATCAGGTTTTTGCACCATTCACTGGTGTAAATCATCATCGTCAAAGAATAACCTTTGGAGCTGCATTTTTAGCTGATGAAAAAGAAGAGTCATTTGTGTGGTTGTTTGAGACATTTTTGAAAGCAATGGGTGGGAATAAACCTGTTATGATAATAATAGATCAAGACCAGGCTATGAAGAATGCAATTGAAAAGGTTTTAAAAGGGTCATCTCCTAGATTTTGCATGTGGCATATTCTAAAAAAACTTTCTGAAAAGGTGGGTGGCACCTTAAATCAGAATGATGATTTTAATAATCGTCTCAATTCATGTATTTGGAACTCAGAGTCCTCTGAGGAATTTGAACTTGAATGGAATGATATTATTAGTGATTTCAAGTTGGAAGAAAATGGTTGGCTTTCTACAATGTATGAACTTAGACGCATGTGGATACCAGCTTATTTCAAAGATATATCTATGGCTGGAATTTTGAGAACAACCTCAAGATCAGAGAGTGAAAATTCATTCTACGGCAACTATTTGAATAAAAAGCTTAATTTGGTTGAGTTTTGGATGCGGTTTGTGGAAAACGGATTAAAGGGGGGAAAGAGAAGGCAATAG 1464 0.3429 MFIYRKLILEMDDNEVDLATHTEEFNELENKLEEWIPQCDVELKPVIGKFFDTLLEAGDFYKNYAHAVGFSVRNSTETKDTNGVRWKYFLCSKEGFKMEKKVDEHKLLISEDSLPKGRKRKLTREGCNARIVFRRNDEGKFEVSKFYEGHSHTLVTPRKKQLLRSARSVNSVHKNLLFACNRANVGTSKGYQILKEQVGSYEDIGCTQRDFQNFSRNMKELIKDSDAYMFIDNFKRKHEMNNSFFYDYQSDNDGKLKYVFWADGISRKNYSLFGDVVSFDTTYSTNKYHQVFAPFTGVNHHRQRITFGAAFLADEKEESFVWLFETFLKAMGGNKPVMIIIDQDQAMKNAIEKVLKGSSPRFCMWHILKKLSEKVGGTLNQNDDFNNRLNSCIWNSESSEEFELEWNDIISDFKLEENGWLSTMYELRRMWIPAYFKDISMAGILRTTSRSESENSFYGNYLNKKLNLVEFWMRFVENGLKGGKRRQ* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3072 487 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 37 172 - -
Mal2g3072 487 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 213 478 IPR031052 GO:0006355
Mal2g3072 487 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 37 172 IPR031052 GO:0006355
Mal2g3072 487 Coils Coil 11 31 - -
Mal2g3072 487 Pfam FAR1 DNA-binding domain 59 155 IPR004330 -
Mal2g3072 487 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 213 478 - -
Mal2g3072 487 Pfam MULE transposase domain 276 370 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3072 Mal-Chr2 43326010 43327473 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal2g3072 FAR1 1e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3072 - - cqi:110709295 523.472