LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal2g3045	ATGAAGCTGCAATATGATATGCAGTTTTTCACATCCATCTTGTTCATTGGTTTTGTTGCGGTGTTGTTTCGTTTGTACACTAGTTTTGTGAAGAAACCAAACATGCTTCGTTCTAAGCTAAGGAAACAAGGTATAAGTGGTCCACCTCCAACTATATTGCTTGGAAATCTAATTGACATAATCAAATCTCAACCTACCATCCCAAATTCTCCTTCTTTTGAGCCCCTTGTCACTCACAACACTGCTGCTCTTGTCTTTCCCAAATTTGAAGAATGGAGAAAGCAGTATGCAGGTAAATTGTTTATGTTTTCTTTTGGAAACATACAAACATTGTGTGTGAACCAAACAGACATAGTAAAAGAAATCACCACATGTACTTCTTTCAATTTGGGAAGGGCTTCATTTCACAAGAAACTACTTGGACCTTTGTTGGGTGATGGTATTTTAACTTCAAATGGGGCTACATGGGCCTATCATAGAAAAATCTTAGCTCCAGAATTATACATCGAGAAGGTTAAGGGAATGGGGAATATTGTTAGTGAGTCTTGTGGATCTCTCATAAGCATATGGAGTAGTAAAATAGAGGCAGAAGGTGGAGTTGTGGATATAAATATTGACGAGGACATGACAAGATTAACTGGGGATGTTATTTCAAGAGCATGCTTTGGAAGTGATTATTCTAAGGGGGAACAAATTTTTTTGAAACTTGGAGCTCTCCAAGAAGCCGTTTGTTCCTGGAAAAATCTCTCTTCTGCTGTTCCTGGCATGAGCTACCTTCCAACAAAGACCAATAGAAAAGCATGGATATTAGAAAAGGAAGTGAAAAGTTTGATACTTGAAGTGGTGAAGGAAAGAAAAGAAAAAACTAGTTTAGGAAAGGACTTGTTGCAAATGGTTATTGAAGGTGCCAAGGAAAGTAGTCTCACACAAGATGCCAGTGACCGTTTTATTATTGATAACTGTAGAAATATATACTTTGCAAGCTTTGAATCAACTGCAGCTGCTGCTAAATGGTGTCTTATGTTATTGGCATCAAATCAAAATTGGCAAGATCGTGCTCGTGCCGAGGTACAAGAAATTTGCAGTGGTAGAATCCCAGATTATGATATGCTTTTAAAGATGAAACAGACCATAATTTTTATTCTGATGACATTAACTAATTGCACTTGTTTGTTTTGGCATGCAATGTACCTTATCCACCTGTACCTTTATTCTGGTAACAAAAACTTTCATGAATCCTTGCGCCTTTATCCACCTGTACCTTTATTGCCAAAGCAAGCTTTCAACGACATGAAATTTGGGAATATTGATGTTCCTAAGGGCACTGACCTTTGGATATTGATAATAAGTTTGCATACAAATCCTGAAATATGGGGAGATGATGCCTACAAATTCAATCCAGAAAGATTTTCTAATGGAACTGTAGGTGCTTGTAAGGATCCACATGTGTATATGCCTTTTGGAGTTGGCCCTAGAGTGTGTCTTGGACAGAACTTGGCGATGCTTGAACTTAAGATGCTTATAGCTCTAATTTTGTCCAACTTTTCTTTCTCCCTTTCTCCTAGATACGTACATTCACCTGCACTTGGGATTGTAATGAAGCCTGACCATGGAGTCCAGCTCCTAGTAAGAAAGCTATAA	1641	0.3803	MKLQYDMQFFTSILFIGFVAVLFRLYTSFVKKPNMLRSKLRKQGISGPPPTILLGNLIDIIKSQPTIPNSPSFEPLVTHNTAALVFPKFEEWRKQYAGKLFMFSFGNIQTLCVNQTDIVKEITTCTSFNLGRASFHKKLLGPLLGDGILTSNGATWAYHRKILAPELYIEKVKGMGNIVSESCGSLISIWSSKIEAEGGVVDINIDEDMTRLTGDVISRACFGSDYSKGEQIFLKLGALQEAVCSWKNLSSAVPGMSYLPTKTNRKAWILEKEVKSLILEVVKERKEKTSLGKDLLQMVIEGAKESSLTQDASDRFIIDNCRNIYFASFESTAAAAKWCLMLLASNQNWQDRARAEVQEICSGRIPDYDMLLKMKQTIIFILMTLTNCTCLFWHAMYLIHLYLYSGNKNFHESLRLYPPVPLLPKQAFNDMKFGNIDVPKGTDLWILIISLHTNPEIWGDDAYKFNPERFSNGTVGACKDPHVYMPFGVGPRVCLGQNLAMLELKMLIALILSNFSFSLSPRYVHSPALGIVMKPDHGVQLLVRKL*	547

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal2g3045	546	Gene3D	Cytochrome P450	33	546	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mal2g3045	546	PRINTS	P450 superfamily signature	408	419	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mal2g3045	546	PRINTS	P450 superfamily signature	485	494	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mal2g3045	546	PRINTS	P450 superfamily signature	327	344	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mal2g3045	546	PRINTS	P450 superfamily signature	494	505	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mal2g3045	546	Pfam	Cytochrome P450	85	375	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mal2g3045	546	Pfam	Cytochrome P450	410	523	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mal2g3045	546	PANTHER	CYTOCHROME P450 FAMILY MEMBER	15	385	-	-
	Mal2g3045	546	PANTHER	CYTOCHROME P450 FAMILY MEMBER	410	540	-	-
	Mal2g3045	546	PRINTS	E-class P450 group I signature	316	333	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal2g3045	Mal-Chr2	42549961	42558931	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal2g3045	118	543	Cytochrome P450	AT5G24900	39.359	1.18e-108	329

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal2g3045	K24544		-	gmx:100785420	731.48

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