Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3026 ATGGAATACAGAAGGTTTGATAATAGTCAAGAAATTGAGGCTGAAAATGTTGAAGGAAGTCATGAAGTGGTAAACAATGGTGACATGGAAGAAGATGAGGATGGATTTGACTATGGTGGCATGGATTATGGAATTGATAATGAAGGGGCAGAATATGGTGACAATGAAGAAGATGATGGAATTGGAATTGATGATGAGGTTGAAATTGATGATGAGGATGAAGTATATCAAAATGGTGACATGGAAGAAGAGGATATTAATGATGAGGATGAAGTAGTTCAAAATGGTGACACGGAAGAAGGGGATGGAAATGAGGCTCAAGGAGTTCAAAATGATGACATGGAAGAAGATGGAAGTGGTTATGAAGGCCAATATGTCCTAGTTAATAGTGTTGAGGACATTGCGGCATTGGACCTGAGTGGTTTAGGGCCTTTATGTGCAAGGAAATTTGAATTTGGAGGCATGGAAATTGCTTATCAGTTCTATATGTCGTATGGAAGAGCGAATGGATTTTCAGTCCGGAAAGGCAAGTTAATTTACTGCAAAACGGGAGAAGTAGTGCAACGCACATTTGTTTGCCATAGACAAGGATATAGGGAAGTCAGAGCACTAACTGAGGAGAATAGAAAACGTCCGGTAAAACGTGAGACTCGATGTGGATGTAAAGCTTTGTTTCGGGTACACATAGATGTTTTCACAAAACGGTGGCGAGTTACAGTTTTTACAAATGAGCACAACCATGAGCTAGTTTCTCAAGAACATTGTGGATTGCTACCTAAACACTGTGCAATGACAGATTCAGACGTGATGCAAATGAACGCTATGGTAAAAAGTGGCATTTTACCTTCTCGCATATATTCTTCATTTGCACATCAATCAGGAGGATATGAGAAAATTGGTTTCCGTCGGAAAGACCTGTATAATCAATTAGCGAGACAACGACGTTTGCAACAGTCTGATGCAAAATCTGCACTAAATTATCTTCGTGGCTTGCGTTTGAATGATCCCATGATATTTTTTAAGCACACTACTGATTCCACAGGTAGGCTAGAACACCTGTTTTGGTGTGACGGAAAGAGTCGTCTTGATTACCAAGTTTATGGCGACGTTGTTGCATTTGATGCAACATATGGTAAGAACAAATACTATTGCCCTTTAGTTGTGTTTGCTGGTGTGAATAATCATAACTCTACTATAATTTTTGGTGGAGCTATTGTTGCTGATGAAAAAGAAGAAACCTATGTCTGGGTGCTTTCACGGTTTTTGGAAGCAATGTCTGGAAAATCGCCATCTGCTGTAATCACTGATGGTGATTTAGCAATGAAAAATGCAATAAAACGAGTTTTTCCAGATGTTCATCATAGACTGTGTGCGTGGCACTTGCTTCGGAATGCAACCTCCAACATAGGTGATCCTGCATTTGTGGGTGAATTTAGAAAATGTATGTTAGGTGATTATGAGGTTGGAGAATTTTCCAGGAAGTGGGCTGAAACTGTTGATAAATTTGGGTTGCATGACAACAATTGGATCAAAGAAACATATGAGAAGAGAAAGTCATGGGCAACAGCACATACTCGTGGCCACTTCTTTGCAGGATTCAGAACTACATCTCGATGTGAGGGGCTGCATGCAGAGTTAGGGAAGTTTGTTCACTCCCTTTACAACTTGTCAGATTTTTTGCTCCACTATCACCGTTGCCTAAATTTCATGCGGTTTAAAGAGGTACAAGAAGACTTTGATACTGAATATGGTGACCCAGTTCTCATTACCAAATTCACTAAACTTGAGCTATCTGGCGCGAAGGTATTTACGAAAGAAATCTTTTGTAAATACCAGACTTTCATCAACCGATCTGCTTCCATGGTTGTAACTGCAACGAAAGAAATATGTGGGCACTACATCTATACGATTAGGAGGTACAGTTTGCCAGAACGGGATTGGCGTGTATCATTTAACCCTTCGGGAGATATTTTCAAGTGTTCTTGTCAGAGGATGGAGTCTTTTGGAATTCCGTGTGAGCATATCATTAAAGTTTTGGTTTTTAGTAATTATACTGAGTTGCCTCAATGCCTTGTGATGAGTAGATGGACAAAAAATGCAAAGGATATATTAGGTAGAAGTTCAAATGGTCGTCCGAGATATTGGGACTCGCACCTTGCAACCAGATACGGAGCATTGATGTCTAGATGGGGAAGATTGTCTAAATTAGTCGTTGACAACGGTAATGACTACAAAGAGCATATGGACATGGCAGCTGCAGCTATTTTGAAAGCCGAACAAAAGAGAGGCATATGTGATGGCACGACAAACAATGTAGAGGAGGCCCCTGAGGAAGAAAATTTGCAAAATCCTGCTTCTGCTAGAACCAAAGGTAGAGGTGGTGGCGTTGGCCCTTCTAGTGGAACAAACAATAGGCGTGTCACCCATTGTTCTACATGTGGTGCTTCTGGTCATAATAAGAAAACATGTCCTAAAAGAACGGTTGGTACTCAAGATGACAATAATATTGATGAAAATGTATGTTAA 2526 0.4022 MEYRRFDNSQEIEAENVEGSHEVVNNGDMEEDEDGFDYGGMDYGIDNEGAEYGDNEEDDGIGIDDEVEIDDEDEVYQNGDMEEEDINDEDEVVQNGDTEEGDGNEAQGVQNDDMEEDGSGYEGQYVLVNSVEDIAALDLSGLGPLCARKFEFGGMEIAYQFYMSYGRANGFSVRKGKLIYCKTGEVVQRTFVCHRQGYREVRALTEENRKRPVKRETRCGCKALFRVHIDVFTKRWRVTVFTNEHNHELVSQEHCGLLPKHCAMTDSDVMQMNAMVKSGILPSRIYSSFAHQSGGYEKIGFRRKDLYNQLARQRRLQQSDAKSALNYLRGLRLNDPMIFFKHTTDSTGRLEHLFWCDGKSRLDYQVYGDVVAFDATYGKNKYYCPLVVFAGVNNHNSTIIFGGAIVADEKEETYVWVLSRFLEAMSGKSPSAVITDGDLAMKNAIKRVFPDVHHRLCAWHLLRNATSNIGDPAFVGEFRKCMLGDYEVGEFSRKWAETVDKFGLHDNNWIKETYEKRKSWATAHTRGHFFAGFRTTSRCEGLHAELGKFVHSLYNLSDFLLHYHRCLNFMRFKEVQEDFDTEYGDPVLITKFTKLELSGAKVFTKEIFCKYQTFINRSASMVVTATKEICGHYIYTIRRYSLPERDWRVSFNPSGDIFKCSCQRMESFGIPCEHIIKVLVFSNYTELPQCLVMSRWTKNAKDILGRSSNGRPRYWDSHLATRYGALMSRWGRLSKLVVDNGNDYKEHMDMAAAAILKAEQKRGICDGTTNNVEEAPEEENLQNPASARTKGRGGGVGPSSGTNNRRVTHCSTCGASGHNKKTCPKRTVGTQDDNNIDENVC* 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3026 841 ProSiteProfiles Zinc finger SWIM-type profile. 647 683 IPR007527 GO:0008270
Mal2g3026 841 Pfam FAR1 DNA-binding domain 160 250 IPR004330 -
Mal2g3026 841 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 126 702 IPR031052 GO:0006355
Mal2g3026 841 MobiDBLite consensus disorder prediction 796 818 - -
Mal2g3026 841 MobiDBLite consensus disorder prediction 1 118 - -
Mal2g3026 841 Pfam MULE transposase domain 370 464 IPR018289 -
Mal2g3026 841 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 126 702 - -
Mal2g3026 841 MobiDBLite consensus disorder prediction 49 98 - -
Mal2g3026 841 Pfam SWIM zinc finger 660 679 IPR007527 GO:0008270
Mal2g3026 841 MobiDBLite consensus disorder prediction 1 18 - -
Mal2g3026 841 MobiDBLite consensus disorder prediction 768 841 - -
Mal2g3026 841 ProSiteProfiles Zinc finger CCHC-type profile. 810 825 IPR001878 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3026 Mal-Chr2 42057857 42060382 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal2g3026 MULE 4.6e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3026 - - ccaj:109791994 664.455