Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3015 ATGATCCCACAACAAGATTCTGAGTTTGATCCCAATTATCTCAAACCATATTACGGAAAGTTGTTTCCTTATGCTGATATATTCAAATGGATGTCTTATGGCCACGATGGGAAGCATCCTGGTTGTGATCAGTCCTACTTTGGAAGAAGGGAATTTTCCTTCACTCTGAATGGTGATTTTTATTTGCGCTTCCAATCTTACAACAATGCCCTTGAGCTCGAAAACTCCATCAAAGAAAAATGCCCTTTAAAGATTGACATTGGACCTGTCTACACAGTCGATCCTGCAAAAAGGCATGCTTATGCACAGAGTGATAATAGTGTCTTCACTCCAGTTGAGAGGGAGTTGATTTTTGACATTGATATGACAGATTATGATGATATCAGATACTGCTGCAAGGGTGCTGATGTTTGCTTGGATTGCTGGCCATTGATGACTGTAGCCATCAAAGTGATTGATACTTCCTTAAGAGATGACTTTGGCTTTAAGCACATACTCTGGGTCTATAGTGGACGCAGAGGTGTTCATTGTTGGGTGTGTGATGGGAAGGCGAGAAGGTTGACTAATGAGCAAAGAGCTTCTGTTGCTGACTATTTTCGTGTTTACAAGGGCAATGAAAATAGTCATAAGAAGGTTTCTTTGATGGGTGCTGCTCTTCATCCTTTCTTGGCGACATCATACACCAACGTTCTCAAGGACTATTTTGAGAAAGTACTGCTTACACGTCAAAATTTACTTGCTAGTGAGGAGAGATATGAGAAGATCCTAAGCATGATTCCTGATGAATCAATTGCTTCTGAACTTAGAGGAAAATGGCAAGACAATAGGCGTTCCTCTAGTGCAAAAGAAGATATTAATGTTGTGCGATGGGAACAGTGCAAGCAGTTGTTGCAATCTGGAAAACATAAGGCCCAAGGGTTACGTAGATGCGTTGAAGAGATTGTGTTCTGCTATACTTATCCCAGGCTAGATATGGAGGTTTCAAAACATATGAATCATTTGCTTAAAGCACCATTTTGTGTACATCCGAAAACAGGTCGTGTCTGTGTCCCGATTGACCCAAATCGATGCGATGAGTTTGATCCTACTACAGTACCCACCCTTTTCCAGCTTTTAGAGGAGCTTAATAATGAAGGCTTGAGAGCTAATGTTAATGGCGAATGGAGTGGAACTTCCCTTGGAAACTCTGTTACGCTTTTCAGATCGTTCTTAGAACCTTTGCAAAAAGCCTGCAAGGAGGAGATAGAAAGATCCTATAATTTAAAGTTGCAGCAGTCAAAGAACTCCATAGGTTGGTAA 1299 0.4095 MIPQQDSEFDPNYLKPYYGKLFPYADIFKWMSYGHDGKHPGCDQSYFGRREFSFTLNGDFYLRFQSYNNALELENSIKEKCPLKIDIGPVYTVDPAKRHAYAQSDNSVFTPVERELIFDIDMTDYDDIRYCCKGADVCLDCWPLMTVAIKVIDTSLRDDFGFKHILWVYSGRRGVHCWVCDGKARRLTNEQRASVADYFRVYKGNENSHKKVSLMGAALHPFLATSYTNVLKDYFEKVLLTRQNLLASEERYEKILSMIPDESIASELRGKWQDNRRSSSAKEDINVVRWEQCKQLLQSGKHKAQGLRRCVEEIVFCYTYPRLDMEVSKHMNHLLKAPFCVHPKTGRVCVPIDPNRCDEFDPTTVPTLFQLLEELNNEGLRANVNGEWSGTSLGNSVTLFRSFLEPLQKACKEEIERSYNLKLQQSKNSIGW* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3015 432 SUPERFAMILY Prim-pol domain 8 377 - -
Mal2g3015 432 CDD AE_Prim_S 23 362 IPR014052 GO:0003896|GO:0006269
Mal2g3015 432 PANTHER DNA PRIMASE 20 432 - -
Mal2g3015 432 PANTHER DNA PRIMASE SMALL SUBUNIT 20 432 IPR014052 GO:0003896|GO:0006269
Mal2g3015 432 Pfam DNA primase small subunit 118 353 IPR002755 GO:0003896|GO:0006269
Mal2g3015 432 Gene3D DNA primase, PRIM domain 1 413 - -
Mal2g3015 432 TIGRFAM primase_sml: putative DNA primase, eukaryotic-type, small subunit 15 370 IPR014052 GO:0003896|GO:0006269
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g3015 3 432 Core DNA Replication Machinery Family AT5G41880 67.593 0.0 623
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3015 K02684 - gmx:100780574 784.637