Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3006 ATGGCGAGTTTCCTAACGGATTTGGCGAAGCCATATGTGGAGAAATTGATAAATGGGGCGATAGCAGAATCAAGTTATATATGTTGCTTCACATGCATAAGTAAGGATTTCGAAGAAGAAAAAGCTAGGTTGGAAAAAGAAAGGACAATTGTGAAGCAACATGTTGATGTGGCAACCAGAAGAGGAGAAGATGTTCAAGGTAATGCTCTAATATTTTGGGAAGAAGAAGCTGATAAGCTCATTCAAGAAGACACAAAAAAAAAACAAAAATGTCTCTTCGGAATTTTTCCCCATTGCATATGGCGATATAGAAGGGGAAAGGATCTGGCAAATAAGAAGGAGAAAATAAAAAAATTGATTGAAACTAGAAAGGAACTTGCAATTGGACTCCCTGCTCGTCTTCCAGATGTTGAGCGTTATTCATCCGGACACTATATTTCTTTTGAAAGTAGAGAATCGAAATACAAAGAGCTTTTAGATGCTTTGAAAGATGACAACAATTTTATAACCGGGTTGCAAGGGATGGGGGGCACAGGAAAAACTACATTGGCCAAAGAAGTGGGTAAGGAACTTAAGCAATCCAATGTATTTACTCATGTCGTCGATACGACATTGTCATTATCTCCTGATATTAAAAAGATTCAAGATGATATTGCTGGACCCTTGGGATTGGAATTTGATGAATGTAGTGAATCAGACCGACCCAAAAAACTATGGAGTAGATTAACCAATGGTGAGAAGATTCTTCTAATATTAGATGATGTGTGGGGAGATATCAATTTTGATGAAATAGGGATTCCAGATAGTGGCAATCACAAAGGTTGTAGAGCTCTCGTAACCACGCGCAATCTGCGAGTATGCAACAAATTAGGATGCAGTAAGATAATCCAACTGGAGCTTTTATCCGAAGAAGACGCGTGGATCATGTTTAAAAGGTATGCTGGTCTAAGCGAAATTTCAACTAAGAATTTGCTCGAGATAGGCCGTCAAATTGGAAATGAATGCAAAAGGCTACCAATTGCAATTGCTGCTATTGCCAGTAGTTTGAAGGGCGAACAACGGCAGGAAGAATGGGATGCAGCCTTAAAATCCTTGCAGAAAAGTATGTCCATGCACGGTGTTGATGATGAATTGGTTAAAATTTATGAGTGCTTCAAGTTCAGCTATGATAATATGAAGGATGAAAATGCCATGAGACTATTCCTCTTGTGTTCTACATTTCGAGAAGATGAAGAAATTCATACTGAAACGTTAACCAGACTTGGCTTCGGAGGAGGGCTTTTTGGGGAAGATTGTAGCAGCTACGAAGATGTTAGAAGTCAAGTAGTTATATCCAAAAATAAACTCATAGATTCTTGTTTATTGTTGGAGGTCGATCGAAGCAATGTGAAAATGCATGACTTGGTTCGTGATGCAGCCCAATGGATAGCAAACAAAGAGATTCAAACAGTGAAGTTGTATGAAAAAAATCAAAAGGCAACGGTTGAAAGGGAGACAAATATTAAATATTTGTTATGTGAAGGAGAACTTAAGGATGTGTTTTCCTTTAAGCTTGATGGTTCCAAGCTTGAGATTCTAATTGTCATTCTGCATAAGGAGGAAGACTGCCACAATGTGAAAATTGAATTCCCAAATTCATTTTTTGAAAATTGTACCGGCCTTCGAGTTCTTGATTTATGCTATGATAATTATCCGATTCTAGATTTATCATTACCTCAATCAATTCATTCGTTGAAGAATATTCGATCTCTTCGCTTTACACGTGTCGATTTGGGTGATATCTCTATTTTTGGAAATTTACAAAGTCTTGAGACACTTGATTTGGATGGTTGTAAAATTGATGAATTGCCACACATAATTACAAAACTAGAGAAACTTAGATTATTGAACTTGAGCAATTGTATTATTGCAAGCAGCAATCCTTTTGAAGTGATTGAAGGATGCTCATCCCTTGAAGAGTTGTATTTCAGAGATAGTTTTAATGATTTTTGCCGAGAAATAACTTTTCCTAAATTGAAAAGGTTTAATATCGATGAATTTCTGAGGTTTGAGGATGAACCATCATCAAAGTGTGTGTCTGTTGTATTCAAAGAAGAGGTTTTCCTATCTGAAACAACACTCAAGTATTGTATGCAAGAAGCAAAGGTTCTTAGACTGAGAAGAATTGAGGGGGGATGGAGAAATATCATACCTGAGATTGTTCCTATTGATCAAGGTATGAATGATCTCGTTGAGCTTGAATTGAGATTCATTTCACAACTACAGTGCCTCATTGACACTAAGCATAATGAAACGATATCAAAAGTCTTCTCCAAGTTGGTTGTACTAGATCTTTGGAACCTAGAAAATTTGGAAGAATTGTGCAATGGCCCTATTTCCATTGACTCTCTGAACAGTTTAGAGAATCTGTTCATCAAGGATTGTAAACATTTGCAAAGCTTATTTAAGTGCAACCTAAACCTATTCAATCTAAAGAGAGTGTCGTTGGACGGATGCCCAATGTTGATCTCCCTATTTCAACAGACAACTTCCCGTAGCCTAGTGTTGTTGGAGAGTCTAGAAATAATTGACTGCAACAGTCTTGAATACATAATAGATAAAAGAAAAGGGGAGGAATTGAGAGGTGAAATAGTTGATGATAATGAAAGCACAACTCAAGGCTTAATGTTTCAGAAACTCGAAGTTCTTAGTATTGAGGAGTGTCCAAGAATTGTATTAATACTTCCAGTTCTCTCTGCTGGTGATCTTCCAGCACTAGAATCCATCACAATAAAAAGTTGTGATAAGCTGAAATACATATTTGACCAAGATGTCAAACTTGGTTCCCTAGAAACAATGGAGCTTAATGGCATACCGAATTTCATCGACATTTTCCCAGAATGTAATCGTACCATGTCTTCGTCCATTAAGGGGCCATCTTCCATTTCTGAAGATTCTTCCAAACCACAAGAACAATCAGACCCAATCAAGTGCAATATCTTTTCATGGAGTGATATATATTGTTGTGGTAAAAAATATGGGCACAAATTGAGGAGTACCACAAGTACTGAAATCCCATTGGTTTCTAATGATCAACCGCATGACAACTTAATGGAATCAAATTCATTTTGCCTTGACATATGGGAACGTGCTCAATGTCTTTCAAGACAGTCACATATCTTGTGCAATATTAAACAGATTACACTGGAGAATATTTCAAAGATGAAATCGATATTTATCTTATCTATTGCTCCAAGAATGTTGTTGGAGACTTTATGGATTAGTAAGTGTGATGAATTGAAGCACATTATAATAGACATAGGAGATAATGATAGTACTGGTGGCAGTAACTGGGACATTGTCTTCCCAAAATTAAGAATGATTGAAGTTAAAGATTGTGAGCAATTGGAATACATATTTGGACGCTACACTGATGATCATGATCAAAACCACAGGGAGATTCACCTTCATCTTCCAGCATTGGATACTCTCTATCTTTGTAATCTGCCAAGTTTAGTCACTATGTGTCCGAAACAATATCACATGACATTTCCACCTTTGAAAGATCTTCAGCTCAATAAATGCGGGGAGGTTACTAACATCAAATCTATTGGTGATTTCATAACTCATCATTCAGTAATAAGATCTGTGGACGGTACAATCATCAAGGAATCGAGTGGGAATGTGGATCATTTTCTCGCTTTGGAGAGACTCAGGGTAGAAAACTCCAAAGTAGAAAGTATCTTTTGTCTCAATGAAATAAATGAACAACAAATGAACTTTGGTTTGGAACGCATTGATTTGGATGTTATGCCTATGATGACATGCCTTTTTGTGGGTCCCAAAAATTCATTTTCCCTCCAAAACCTTACAGATTTAAAAATCATGCGATGTGAAAAATTGAAAATTGTTTTCTCCACTTCTGTAATAAGGTGTCTACCACAGTTGCTTAATATGAGAATTGAAGGATGCAAAGAGTTGAAGCATATTATTGAAGATGATTTGGAGAATAAAAACCCCTCAAATTTTATGTCTACAATGACATGCTTTCCAAAGCTAAAATCACTTGTTGTAGTGAAGTGCAACAAGTTGAAATATGTCTTTCCAATTTCCATATATAAAGAGCTTCATGAGCTAGAGGAAATATTTGTAAGAGAAGGTGATGATCAGAAAGCCTTAGTCATGCCCAGAGAATTCAATTTCAAGCTGTAA 4191 0.3663 MASFLTDLAKPYVEKLINGAIAESSYICCFTCISKDFEEEKARLEKERTIVKQHVDVATRRGEDVQGNALIFWEEEADKLIQEDTKKKQKCLFGIFPHCIWRYRRGKDLANKKEKIKKLIETRKELAIGLPARLPDVERYSSGHYISFESRESKYKELLDALKDDNNFITGLQGMGGTGKTTLAKEVGKELKQSNVFTHVVDTTLSLSPDIKKIQDDIAGPLGLEFDECSESDRPKKLWSRLTNGEKILLILDDVWGDINFDEIGIPDSGNHKGCRALVTTRNLRVCNKLGCSKIIQLELLSEEDAWIMFKRYAGLSEISTKNLLEIGRQIGNECKRLPIAIAAIASSLKGEQRQEEWDAALKSLQKSMSMHGVDDELVKIYECFKFSYDNMKDENAMRLFLLCSTFREDEEIHTETLTRLGFGGGLFGEDCSSYEDVRSQVVISKNKLIDSCLLLEVDRSNVKMHDLVRDAAQWIANKEIQTVKLYEKNQKATVERETNIKYLLCEGELKDVFSFKLDGSKLEILIVILHKEEDCHNVKIEFPNSFFENCTGLRVLDLCYDNYPILDLSLPQSIHSLKNIRSLRFTRVDLGDISIFGNLQSLETLDLDGCKIDELPHIITKLEKLRLLNLSNCIIASSNPFEVIEGCSSLEELYFRDSFNDFCREITFPKLKRFNIDEFLRFEDEPSSKCVSVVFKEEVFLSETTLKYCMQEAKVLRLRRIEGGWRNIIPEIVPIDQGMNDLVELELRFISQLQCLIDTKHNETISKVFSKLVVLDLWNLENLEELCNGPISIDSLNSLENLFIKDCKHLQSLFKCNLNLFNLKRVSLDGCPMLISLFQQTTSRSLVLLESLEIIDCNSLEYIIDKRKGEELRGEIVDDNESTTQGLMFQKLEVLSIEECPRIVLILPVLSAGDLPALESITIKSCDKLKYIFDQDVKLGSLETMELNGIPNFIDIFPECNRTMSSSIKGPSSISEDSSKPQEQSDPIKCNIFSWSDIYCCGKKYGHKLRSTTSTEIPLVSNDQPHDNLMESNSFCLDIWERAQCLSRQSHILCNIKQITLENISKMKSIFILSIAPRMLLETLWISKCDELKHIIIDIGDNDSTGGSNWDIVFPKLRMIEVKDCEQLEYIFGRYTDDHDQNHREIHLHLPALDTLYLCNLPSLVTMCPKQYHMTFPPLKDLQLNKCGEVTNIKSIGDFITHHSVIRSVDGTIIKESSGNVDHFLALERLRVENSKVESIFCLNEINEQQMNFGLERIDLDVMPMMTCLFVGPKNSFSLQNLTDLKIMRCEKLKIVFSTSVIRCLPQLLNMRIEGCKELKHIIEDDLENKNPSNFMSTMTCFPKLKSLVVVKCNKLKYVFPISIYKELHELEEIFVREGDDQKALVMPREFNFKL* 1397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3006 1396 Gene3D - 300 393 IPR042197 -
Mal2g3006 1396 ProSiteProfiles Leucine-rich repeat profile. 602 623 IPR001611 GO:0005515
Mal2g3006 1396 Gene3D Ribonuclease Inhibitor 463 687 IPR032675 -
Mal2g3006 1396 Gene3D - 135 297 IPR027417 -
Mal2g3006 1396 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 1171 1327 - -
Mal2g3006 1396 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 49 962 - -
Mal2g3006 1396 Pfam NB-ARC domain 156 391 IPR002182 GO:0043531
Mal2g3006 1396 PANTHER - 49 962 - -
Mal2g3006 1396 SUPERFAMILY L domain-like 464 959 - -
Mal2g3006 1396 MobiDBLite consensus disorder prediction 966 986 - -
Mal2g3006 1396 Gene3D Ribonuclease Inhibitor 1150 1381 IPR032675 -
Mal2g3006 1396 PANTHER - 1171 1327 - -
Mal2g3006 1396 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 404 IPR027417 -
Mal2g3006 1396 Gene3D Ribonuclease Inhibitor 698 971 IPR032675 -
Mal2g3006 1396 Coils Coil 34 54 - -
Mal2g3006 1396 SUPERFAMILY RNI-like 1224 1376 - -
Mal2g3006 1396 PRINTS Disease resistance protein signature 598 614 - -
Mal2g3006 1396 PRINTS Disease resistance protein signature 169 184 - -
Mal2g3006 1396 PRINTS Disease resistance protein signature 242 256 - -
Mal2g3006 1396 PRINTS Disease resistance protein signature 335 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3006 Mal-Chr2 41718950 41763964 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g3006 170 641 WRKY Transcription Factor Family AT5G45050 23.694 2.35e-15 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3006 - - mtr:MTR_3g062420 2010.73