Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2988 ATGGCGTTCTTTGGTAAAATGGGGAAGCTACTCAAGAATTCTGCTGTCAAGAAGATCAATCATGGTCTGTCTTCGGTATCTCAAGCAATTAGATCCATGTCATCTACAAAGCTTTTTGTTGAAGGTCTTTCAGATAAAAATGATGAAACTAGTCTCCGAAAACATTTTGCTCGCTATGGGGAAGTTCTTGATGCAAAGATTATCAAGGATCGTGAAACAGGCAGGTCCCGAGGTTTTGGTTTCGTAACTTTTGCAACGACCAAGGACGCATCTGCTGCCCTTCAGACCATCAATATTTCCCTTCAGGCCATAAAAAACATGGATCCTAATGGTCGGAGGATACGAGTGAATTATGCTAGAGAAAGGTCGCGTCCTGGGGAGTTTCGTGCCAATAGTGTCCCAACCAGCTATCACGGTAGCCATCTCAGGAGTAGTTACGCTACTGATGGTGAAATCAGCAGAATCTATAATTCGAATGATGATTATGAACGAAGCATAGTACTGGGTGGATACAAGCTGCTGGATGCGCTGAAAAGGATTTATTGA 546 0.4304 MAFFGKMGKLLKNSAVKKINHGLSSVSQAIRSMSSTKLFVEGLSDKNDETSLRKHFARYGEVLDAKIIKDRETGRSRGFGFVTFATTKDASAALQTINISLQAIKNMDPNGRRIRVNYARERSRPGEFRANSVPTSYHGSHLRSSYATDGEISRIYNSNDDYERSIVLGGYKLLDALKRIY* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2988 181 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 1 126 - -
Mal2g2988 181 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 36 121 IPR000504 GO:0003723
Mal2g2988 181 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 38 98 IPR000504 GO:0003723
Mal2g2988 181 Gene3D - 12 133 IPR012677 -
Mal2g2988 181 SUPERFAMILY RNA-binding domain, RBD 24 136 IPR035979 GO:0003676
Mal2g2988 181 SMART rrm1_1 37 117 IPR000504 GO:0003723
Mal2g2988 181 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 3 MITOCHONDRIAL 1 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2988 Mal-Chr2 41239421 41240356 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2988 32 98 Eukaryotic Initiation Factors Gene Family AT3G16380 38.806 3.88e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2988 K12741 - mtr:MTR_3g014000 155.992