Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2966 ATGCCAAAAATGTCTAAGAGAGGTCCAGCTGAGAAACACCACACTGTTGACAAGGGTAATGAAAATGTGTCAGAAAAAACTCATAATAAATTGGATGCTAGTAAGAACACTGCAATGGTGGAGGTTACTATCTCTGAAACTTTTCATAGCCCTCTGACAAAGGAGACAATACCAACCTCCAACACCCCTGTCACGGTTTCTGCCATAGAAACTTTGCAAATTGAGAGAACTGATGAGGAAAGTAACTTTGAGGAGTGTAATGATTTACCTATGCAACCAGAAAAATCAATTGCTCCTGCTTTAGCACTTCACAATCCTTTTGATGTTTTAAATGTGGAGGGTGATTCTCCTTCTAGTGAGGCTTTGCAAGATGTCCAGGAACCAGCAGTCAATTCAATAACATTGCCTTATGCAATTACTGAATTTGATTCAAGTTTTCCTAAAGGGAATGCAATCTCAGAGTTAGGTAACTTGACAGAGGTGCCTTTTAGGACCTATCAGTCAGTTTCCTCAATCTCCACACATAACACAGTTTGGGATCCTTTTGTGGCACAATTCTTGGATTCTTCTGGTTTGGATAGCTCACTCATGCCTTGTGTCATGCCTCAACCTATCCCTACTTACCACACCTCTCTATCAGCAGACAAGCTTCCTGCTTTGAAGCCTATCAACGCTATTGTGCATGTTGCAGTCGTTTGTTCTTTTGAAGCTCGGAGAAGTTTAATCAAGAAGATTGATGAAATAACCACGCTTTGTGGGATTGAAGCGGCTGCAATAATCGTTGGAGAAAATAATCCTCAGCCAGAGGTTTGGCCTTCGCCGTTGGGAGTCCAAAGGGTGTTGTCAAGGTTTAGGAGATTGCCAGAATTCGAAGTAAGCAAAAAAATGTTTAATCAAGAGAGTTTCTTGAAGCAAAGGATCCAAAAAGCACAAGAACAGCTGAAGAAACAAAGGAATGACAACAGAAGGAATGAAATGACACATCTCATGTTTCAATGCCTTAATGCTGGTCAGATCTTTGACAATCTTGAGATGAATGATCTCAATGATATCTCATGGTTGATTGATCAGAACTTGAAACAAATCGAAAGGAAAATCGAAGAGTCTCAAGCTGAAGAGATTATCCAAAACCAAGCGGAAAATGTGACTACAAGGGAGCAACAAACGGAGAACATTTCTAATGCAATGCTAAGGCAACATCAGTCAGTGGATTTCACCAACAACCATATTGGTGATGTACCAAATGGTTTTTGGCCATAA 1260 0.404 MPKMSKRGPAEKHHTVDKGNENVSEKTHNKLDASKNTAMVEVTISETFHSPLTKETIPTSNTPVTVSAIETLQIERTDEESNFEECNDLPMQPEKSIAPALALHNPFDVLNVEGDSPSSEALQDVQEPAVNSITLPYAITEFDSSFPKGNAISELGNLTEVPFRTYQSVSSISTHNTVWDPFVAQFLDSSGLDSSLMPCVMPQPIPTYHTSLSADKLPALKPINAIVHVAVVCSFEARRSLIKKIDEITTLCGIEAAAIIVGENNPQPEVWPSPLGVQRVLSRFRRLPEFEVSKKMFNQESFLKQRIQKAQEQLKKQRNDNRRNEMTHLMFQCLNAGQIFDNLEMNDLNDISWLIDQNLKQIERKIEESQAEEIIQNQAENVTTREQQTENISNAMLRQHQSVDFTNNHIGDVPNGFWP* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2966 419 MobiDBLite consensus disorder prediction 1 35 - -
Mal2g2966 419 Coils Coil 300 327 - -
Mal2g2966 419 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL80 238 394 - -
Mal2g2966 419 SUPERFAMILY SRF-like 238 308 IPR036879 GO:0003677|GO:0046983
Mal2g2966 419 MobiDBLite consensus disorder prediction 1 32 - -
Mal2g2966 419 PANTHER SERUM RESPONSE FACTOR HOMOLOG 238 394 - -
Mal2g2966 419 Gene3D - 235 330 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2966 Mal-Chr2 40731590 40734678 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2966 245 367 Type I MADS-box Gene Family AT5G48670 53.659 2.30e-38 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Mal2g2966 SRF-TF 5.7e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2966 - - gmx:100813231 190.274