Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2958 ATGGCTCAAAAGCTTAGAATGGCACACCAAGAATTTTCCATTGCTCTACTGATTCTATTTGTCTTGTTTATTAACTTGAATATGCAAGGTGCTATAGCTGATTATGGTGGTTGGGAGAGTGCTCATGCCACTTTCTATGGTGGTGGTGATGCTTCTGGCACAATGGGTGGAGCATGTGGGTATGGAAATTTGTATAGCCAAGGATATGGAACCAACACAGCAGCACTAAGCACTGCTTTATTCAACAATGGCTTAAGCTGTGGTTCTTGCTATGAAATGAGATGCAATGATGATCCAAGATGGTGTAAACCTGGCTCTATTATTGTTACTGCTACAAATTTTTGTCCACCAAATCCATCTTTGGCCAACAACAATGGTGGTTGGTGTAACCCTCCTTTGCAACATTTTGATATGGCTGAACCTGCTTACCTTCAAATTGCTGAATATAGAGCTGGAATTGTCCCTGTTTCCTTTAGAAGAGTGCCATGTATGAAAAAGGGAGGAATTAGGTTCACAATCAATGGTCACTCTTACTTCAATTTAGTTTTGGTCACCAATGTGGGTGGTGCTGGTGATGTTCATTCTATATCCATCAAAGGATCAAGAACTGGGTGGCAACCAATGTCAAGAAATTGGGGACAAAATTGGCAAAGCAACTCTTACCTTAATGGACAATCCCTTTCATTTCAAGTTACAACAAGTGATGGTAGAACTATGACAAGTTACAATGTGGCACCAGCAAATTGGCAATTTGGTCAAACTTTTCAAGGAGCTCAATTTTAG 783 0.4036 MAQKLRMAHQEFSIALLILFVLFINLNMQGAIADYGGWESAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMRCNDDPRWCKPGSIIVTATNFCPPNPSLANNNGGWCNPPLQHFDMAEPAYLQIAEYRAGIVPVSFRRVPCMKKGGIRFTINGHSYFNLVLVTNVGGAGDVHSISIKGSRTGWQPMSRNWGQNWQSNSYLNGQSLSFQVTTSDGRTMTSYNVAPANWQFGQTFQGAQF* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2958 260 Pfam Expansin C-terminal domain 169 246 IPR007117 -
Mal2g2958 260 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 178 257 IPR007117 -
Mal2g2958 260 Gene3D - 167 260 IPR036749 -
Mal2g2958 260 Pfam Lytic transglycolase 73 158 IPR009009 -
Mal2g2958 260 SUPERFAMILY Barwin-like endoglucanases 18 186 IPR036908 -
Mal2g2958 260 PRINTS Expansin/Lol pI family signature 55 73 IPR007118 GO:0005576
Mal2g2958 260 PRINTS Expansin/Lol pI family signature 243 257 IPR007118 GO:0005576
Mal2g2958 260 PRINTS Expansin/Lol pI family signature 151 167 IPR007118 GO:0005576
Mal2g2958 260 PRINTS Expansin/Lol pI family signature 205 219 IPR007118 GO:0005576
Mal2g2958 260 PRINTS Expansin/Lol pI family signature 77 95 IPR007118 GO:0005576
Mal2g2958 260 PRINTS Expansin/Lol pI family signature 37 52 IPR007118 GO:0005576
Mal2g2958 260 PRINTS Expansin signature 126 143 IPR002963 GO:0009664
Mal2g2958 260 PRINTS Expansin signature 243 259 IPR002963 GO:0009664
Mal2g2958 260 PRINTS Expansin signature 95 106 IPR002963 GO:0009664
Mal2g2958 260 PRINTS Expansin signature 68 82 IPR002963 GO:0009664
Mal2g2958 260 PRINTS Expansin signature 107 117 IPR002963 GO:0009664
Mal2g2958 260 PRINTS Expansin signature 179 200 IPR002963 GO:0009664
Mal2g2958 260 PRINTS Expansin signature 167 179 IPR002963 GO:0009664
Mal2g2958 260 PRINTS Expansin signature 214 235 IPR002963 GO:0009664
Mal2g2958 260 PRINTS Expansin signature 143 156 IPR002963 GO:0009664
Mal2g2958 260 Gene3D - 24 164 IPR036908 -
Mal2g2958 260 SMART dpbb_1 73 158 IPR007112 -
Mal2g2958 260 PANTHER EXPANSIN-A15 10 260 IPR002963 GO:0009664
Mal2g2958 260 SUPERFAMILY PHL pollen allergen 165 257 IPR036749 -
Mal2g2958 260 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 56 168 IPR007112 -
Mal2g2958 260 PANTHER EXPANSIN 10 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2958 Mal-Chr2 40554922 40557656 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2958 8 260 Expansin Gene Family AT2G40610 78.346 2.87e-150 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2958 - - gmx:100777044 488.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g2958 2 40554922 40557656 Mal2g2958 2 40554922 40557656 ECH
Mal8g1569 8 30554402 30556644 Mal2g2958 2 40554922 40557656 ECH
Mal2g2958 2 40554922 40557656 Mal8g1569 8 30554402 30556644 PCT