Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2883 ATGGACACTCCTCATTCACCTTCCTCCTGTTCCTCCTCTTCCTCCAATTATTCATGGGAAGGACACACCACCGACACAATATATTTAGAAGCTGAAGAGCCGCAGACGCCGTTAGCTGTCCGTCGTGCTCTTCAGCTTCTTAAATCCGGCGTGCCGGAGTTGCGGCTTCAAGCCGCACGTGATATCAGGAAACTCACGAAAACATCACAAAGGTGTCGGCGTCAGCTGTCTGAAGCTGTCGGTCCGCTTGTTTCTATGCTCCGAGTCGACTCGGTCGAGTCACATGAACCGGCTCTTCTAGCTTTGCTTAATCTCGCCGTCAAAGATGAAAAGAATAAAATCGATATTGTGGAGGCCGGAGCATTAGAACCAATACTTAGTTTCCTCAAGTCACAAAATCTAAATCTGCAGGAATGTGCAGCTGCAGCTTTGCTCACACTATCTGCCTCTTCAATCAACAAACCAATTATTAGTGCTTGTGGCGCCATTCCCCTTCTTGTCGAGATTCTTAGAGATGGAAGCCCACAGGCGAAAGCTGATTCAGTAATGGCTCTATCTAATTTATCAACATACCCTAGTAATCTTAGCATTATTCTCGAAACAAATCCAATGCCTTACATAATTGATATCCTCAAAACTTGCAAAAAGTCCAAGAAAACTGCTGAAAAATGTTGTGCTTTGATAGAACCCTTGGTGGATTATGAGGAATGCAGAACTGCCTTAACATCTGAGGAAGGTGGGATTCTTGCAGTTGTCGAAGTTCTTGAAAACGGCACTCTCCAAAGTAGGGAACATGCCGTTGGAACATTGTTGACAATGTGCCAAAGCGATCGATGTAAATACAGGGAACCTATTCTTAAAGAAGGTGTCATTCCAGGACTACTTGAGCTCACTGTTCAAGGAACACCGAAGTCTCAGACAAAAGCGCGCACCCTTTTGCATCTACTAAGAGAATCTCCTTATCCAAGATCTGAAATTCAACCCGACACACTTGAGAATATAGTATGCAACATCATATCTCAGATTGATGGGGATGATCAATCTGGTAAAGCAAAGAAGATGCTAGCTGAGATGGTTCAAGTCAGCATGGAACAAAGTCTGAGGCATTTACAGCAACGCGCACTCGTATGCACCCCGAGTGATCTCCCCATAGCTGGCTGTGCTTCTGAAGTTTCTTTAAAGTAA 1185 0.4464 MDTPHSPSSCSSSSSNYSWEGHTTDTIYLEAEEPQTPLAVRRALQLLKSGVPELRLQAARDIRKLTKTSQRCRRQLSEAVGPLVSMLRVDSVESHEPALLALLNLAVKDEKNKIDIVEAGALEPILSFLKSQNLNLQECAAAALLTLSASSINKPIISACGAIPLLVEILRDGSPQAKADSVMALSNLSTYPSNLSIILETNPMPYIIDILKTCKKSKKTAEKCCALIEPLVDYEECRTALTSEEGGILAVVEVLENGTLQSREHAVGTLLTMCQSDRCKYREPILKEGVIPGLLELTVQGTPKSQTKARTLLHLLRESPYPRSEIQPDTLENIVCNIISQIDGDDQSGKAKKMLAEMVQVSMEQSLRHLQQRALVCTPSDLPIAGCASEVSLK* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2883 394 Gene3D - 33 191 IPR011989 -
Mal2g2883 394 SMART arm_5 234 275 IPR000225 GO:0005515
Mal2g2883 394 SMART arm_5 109 149 IPR000225 GO:0005515
Mal2g2883 394 SMART arm_5 150 190 IPR000225 GO:0005515
Mal2g2883 394 SMART arm_5 68 107 IPR000225 GO:0005515
Mal2g2883 394 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 23 377 - -
Mal2g2883 394 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 161 203 IPR000225 GO:0005515
Mal2g2883 394 Gene3D - 192 371 IPR011989 -
Mal2g2883 394 PANTHER U BOX DOMAIN-CONTAINING 23 377 - -
Mal2g2883 394 SUPERFAMILY ARM repeat 40 344 IPR016024 -
Mal2g2883 394 Pfam Armadillo/beta-catenin-like repeat 110 148 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2883 Mal-Chr2 38287031 38290636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2883 40 317 U-box Gene Family AT2G23140 33.571 7.20e-37 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2883 - - gmx:100809684 622.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g2883 2 38287031 38290636 Mal8g1362 8 25567015 25570334 PCT