Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2843 ATGAGTTTTGTTTTTCGAGGAGCAAGAGCTGATATAGAAAATGGGTTTCCAGGGTTTATACCCGAGAGGCGTGCATTGCGTGTTCATGCAGCACGTCCTAGTAATTCCAACTCACTCACTTTTCTCGTAACAGTTCTCCTGTTATTCATGATACTGAACTCTCACCAGATGTCTCCAAATTTTCTGCTCTGGCTGGTGCTTGGTGTTTTCTTGATGGCTACAATGCTAAGGATGTATGCAACATGTCAACAGCTTCAAGCACAAGCCCAAGCTCATGCAGCAGCAGCTAGTGGCCTTCTTGGCCACACAGAACTACGGTTGCATATGCCTCCGTCGATAGCACTTGCGAGCCGAGGGCGTCTGCAGGGTCTCAGACTTCAGCTGGCACTTCTTGATCGGGAGTTTGATGATCTAGATTATGAAACTTTAAGAGCTCTGGATTCGGATAATGTTTCTACTGCACCTTCTATGACTGAGGAAGAGATAAATGCTCTTCCTGTCCACAAATACAAGGTTTCTGGTCCCCAAAAAAGTAGTTCTTCAATGCAACAAGCATCGCCTTCCACTTCCGCTGAGACACAAGATAATTCAAATGCGGTTGGAAACTCGAAAGCCTCTGATGATGAGCTCACTTGCAGTGTATGCTTGGAGCAAGTTAATGTTGGAGATGTACTTCGTAGCTTGCCCTGCCTGCATCAGTTTCACGCTAGTTGCATCGATCCCTGGCTGCGGCAACAAGGGACATGCCCTGTTTGCAAATTTCGAGCAGGATCTGGGTGGAATGACAATGGACATAATGATATTGCGGACATGGTTTGA 819 0.464 MSFVFRGARADIENGFPGFIPERRALRVHAARPSNSNSLTFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATMLRMYATCQQLQAQAQAHAAAASGLLGHTELRLHMPPSIALASRGRLQGLRLQLALLDREFDDLDYETLRALDSDNVSTAPSMTEEEINALPVHKYKVSGPQKSSSSMQQASPSTSAETQDNSNAVGNSKASDDELTCSVCLEQVNVGDVLRSLPCLHQFHASCIDPWLRQQGTCPVCKFRAGSGWNDNGHNDIADMV* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2843 272 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SDIR1 1 267 - -
Mal2g2843 272 PANTHER TARGET OF ERK KINASE MPK-1 1 267 - -
Mal2g2843 272 Pfam Ring finger domain 211 253 IPR001841 -
Mal2g2843 272 SUPERFAMILY RING/U-box 206 256 - -
Mal2g2843 272 MobiDBLite consensus disorder prediction 164 205 - -
Mal2g2843 272 CDD RING-H2_PA-TM-RING 211 253 - -
Mal2g2843 272 ProSiteProfiles Zinc finger RING-type profile. 212 253 IPR001841 -
Mal2g2843 272 MobiDBLite consensus disorder prediction 173 205 - -
Mal2g2843 272 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 187 258 IPR013083 -
Mal2g2843 272 SMART ring_2 212 252 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2843 Mal-Chr2 37641797 37646415 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2843 1 272 C3H Transcription Factor Family AT3G55530 77.818 9.95e-145 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2843 K16283 - gmx:100777936 454.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g2843 2 37641797 37646415 Mal2g2843 2 37641797 37646415 ECH