Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2842 ATGAACACACCCTCCTCTCCCCATGTTCTCCTTCTTGTTCTTCCTAAAACAATTATCCTTTTAATTTTCATGATGTTCCTTCAAATCCAAACAAGTACTTCTTCTCTCTCATCATCTCCCCCACAAAAAACTCTCTTATTGCCTTTAAAACTCCAAACACTACCACATGGCACAGTTTCACTTCCAAAACCTTCTTCAAAGCTCTCTTTTCAACACAATGTAACCTTAACAGTTTCACTAACACTAGGCTCACCCCCACAGAATGTTACCATGGTCCTTGACACAGGGAGCGAACTCTCATGGCTTCATTGCAAAAAGCTTCAAAATTTAAACTCCATTTTCAACCCCCTCCTCTCTTCTTCATACACCCCCACACCATGCACCTCACCCATTTGCACAACCCGAACCCGAGACTTTCCCGTACCCGCTTCATGCGACCCGAAAAAACTCTGCCACGCTACAATCACCTACGCTGACTCCACCTATATCGAAGGAAACCTCGCTACCGAGACTTTCTTCGCCGGCGGGTCAGCGCAACCCGGAACCATATTCGGGTGCATGGATTCTGGGTTCAGCTCAAATTCAAATGAAGACTCCAAAACAACCGGGTTGATGGGTACGAACCGTGGATCACTATCGTTTGTTACCCAAATGGGGTTACCCAAATTCTCGTATTGCATCTCCGGCAAAGACTCCACCGGCGTTTTGCTTTTTGGCGAAGCGAACATCAATTGGGTCGGGCCATTGAAATATACACCACTCGTGAAAATGACAACCCCATTACCTTATTTCGATCGAGTCGCATACACAGTACGACTCCAGGGAATACGGGTTGGGAAGAAGTTACTTCAGGTACCGAAATCAATTTTCGCACCAGATCATACTGGTGCGGGTCAAACGATGGTGGATTCGGGTACACAGTTCACATTTCTTTTAGGACCGGTTTACACTGCTTTAAGAAAAGAATTTGTAGAACAAACAAAAGGGGTGTTGACCCTCTTGGAAGACACGAATTTTGTCTTCCAGGGAGCAATGGATTTGTGTTTTCGAGTCGGGTCAAATTCGGGTCGGGCGGGTCTTCCACCGTTACCAGTGGTGACGCTTATGTTTGAAGGGGCGGAGATGAGTGTTTCAGGGGAGAGACTATTGTATAGAGTTGCTGACGTGGCAGCAAAAGGGAATAATCAAAGTAATGATTTGGTGTATTGTTTCACGTTTGGGAATTCTGATTTGTTGGGAATTGAGGCTTATGTTATTGGACATTATCATCAAATGAATGTGTGGATGGAGTTTGATTTGGTCAACTCTAGAGTTGGATTTGCTGATACAAAATGTGAACTAGCAAGTCAACGACTAGGTATGTAG 1365 0.4484 MNTPSSPHVLLLVLPKTIILLIFMMFLQIQTSTSSLSSSPPQKTLLLPLKLQTLPHGTVSLPKPSSKLSFQHNVTLTVSLTLGSPPQNVTMVLDTGSELSWLHCKKLQNLNSIFNPLLSSSYTPTPCTSPICTTRTRDFPVPASCDPKKLCHATITYADSTYIEGNLATETFFAGGSAQPGTIFGCMDSGFSSNSNEDSKTTGLMGTNRGSLSFVTQMGLPKFSYCISGKDSTGVLLFGEANINWVGPLKYTPLVKMTTPLPYFDRVAYTVRLQGIRVGKKLLQVPKSIFAPDHTGAGQTMVDSGTQFTFLLGPVYTALRKEFVEQTKGVLTLLEDTNFVFQGAMDLCFRVGSNSGRAGLPPLPVVTLMFEGAEMSVSGERLLYRVADVAAKGNNQSNDLVYCFTFGNSDLLGIEAYVIGHYHQMNVWMEFDLVNSRVGFADTKCELASQRLGM* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2842 454 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 91 102 IPR001969 GO:0004190|GO:0006508
Mal2g2842 454 Gene3D Acid Proteases 243 450 IPR021109 -
Mal2g2842 454 SUPERFAMILY Acid proteases 77 445 IPR021109 -
Mal2g2842 454 CDD pepsin_A_like_plant 75 445 IPR034161 -
Mal2g2842 454 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 20 453 - -
Mal2g2842 454 Pfam Xylanase inhibitor N-terminal 78 239 IPR032861 -
Mal2g2842 454 PANTHER ASPARTYL PROTEASE-RELATED 20 453 IPR001461 GO:0004190|GO:0006508
Mal2g2842 454 Pfam Xylanase inhibitor C-terminal 268 441 IPR032799 -
Mal2g2842 454 Gene3D Acid Proteases 69 239 IPR021109 -
Mal2g2842 454 ProSiteProfiles Peptidase family A1 domain profile. 76 441 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2842 Mal-Chr2 37636038 37637402 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2842 77 255 Miscellaneous Gene Families AT1G44130 30.570 1.89e-14 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2842 - - gmx:100783835 622.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g2842 2 37636038 37637402 Mal8g1321 8 24576159 24577301 ECH
Mal2g2842 2 37636038 37637402 Mal2g2842 2 37636038 37637402 ECH