Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2841 ATGTCAACGGATACAACATCTTATTGGTGTTATAGATGTAATCGTTTTGTAAGATTAGCCAGACAAGAAACCGTTGTCTGCCCCGATTGCGACGGCGGTTTCCTCGAAGAAATTGAACAACCGCCACGCGTGGATTCCCGCCGCCGTCGCTTTCCTGCTGCCGCCATGTACATGATCGGTCAACGTCCAAATTCCGATCATAATAACTCCCGTCCACCTCTTCGAACAACCCGCCGCAACGGTGGTGACCGGTCACCTTTCAATCCAGTCATCGTCCTCCGCGGTGGGGGAGGATCCACGGATGTTGTTACCACCGAAGGTGGTAACAATAACAACAACGGTGGTGGTGGAGAGAGTCGTGGATTTGAGTTATTCTATGATGATGGTGCTGGTTCTGGTTTAAGACCATTACCACCAAGTATGTCAGAGTTTTTGCTTGGATCTGGATTTGATAGATTTTTAGAACAGCTTTCTCAGATTGAGATTAATAGTATTGGAAGATATGAGCATCCACCAGCATCAAAAGCTGCTATTGATTCATTACCAACTCTTGAAATTGATAATACTCATTTGGAAATGGAATCACACTGTGCGGTTTGTATGGAGGCTTTTGAATTAGGTACTGTTGTTAGAGAAATGCCTTGTAAACATATTTATCATCCTGAATGTATTTTACCTTGGCTTGCGTTACATAATTCGTGTCCGGTTTGTCGTCATGAGTTACCGGTTGATTCGGATGGTGGGAGTGGCAATCAATTGCAATCACAGTCGTTGACACAGTCTCAACCGGTTGGTTTGAATGAAGAAGAGAGTAATGTTGGGTTAACTATTTGGAGATTGCCTGGTGGTGGTTTTGCTGTGGGGAGATTTTCGGGTGGGAGAAGAGGTGCTGAGAGAGAGCTACCTGTTGTTTATACTGAAATGGATGGTGGGTTTAATAATGGTGGTGAACCTAGGAGGATTTCTTGGTCTTCTAGAGGGAATAGAGGGAGAGAAAGAGGTGGTGGTTTGAGAAGGTTTTTTGGGAGTTTATTTGGTTGTTTTAGTGGTGGTGTTGGTGTTGGGAATCAACGGTCTGTTACGAGTAGAGAAACGTTGAGGACTAATTCGTCTCATTCTTCAAATATGGATCCCTCTCCGCGTTCGCGAAGGACTTGGTCTATGGATGTAAACAGTGGAATGAGATCATGGTGA 1194 0.4464 MSTDTTSYWCYRCNRFVRLARQETVVCPDCDGGFLEEIEQPPRVDSRRRRFPAAAMYMIGQRPNSDHNNSRPPLRTTRRNGGDRSPFNPVIVLRGGGGSTDVVTTEGGNNNNNGGGGESRGFELFYDDGAGSGLRPLPPSMSEFLLGSGFDRFLEQLSQIEINSIGRYEHPPASKAAIDSLPTLEIDNTHLEMESHCAVCMEAFELGTVVREMPCKHIYHPECILPWLALHNSCPVCRHELPVDSDGGSGNQLQSQSLTQSQPVGLNEEESNVGLTIWRLPGGGFAVGRFSGGRRGAERELPVVYTEMDGGFNNGGEPRRISWSSRGNRGRERGGGLRRFFGSLFGCFSGGVGVGNQRSVTSRETLRTNSSHSSNMDPSPRSRRTWSMDVNSGMRSW* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2841 397 MobiDBLite consensus disorder prediction 245 266 - -
Mal2g2841 397 SMART ring_2 197 237 IPR001841 -
Mal2g2841 397 Pfam Ring finger domain 196 238 IPR001841 -
Mal2g2841 397 ProSiteProfiles Zinc finger RING-type profile. 197 238 IPR001841 -
Mal2g2841 397 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 2 345 - -
Mal2g2841 397 Pfam zinc-ribbon 6 38 IPR039525 GO:0061630
Mal2g2841 397 SUPERFAMILY RING/U-box 177 244 - -
Mal2g2841 397 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RING1-LIKE PROTEIN 2 345 - -
Mal2g2841 397 MobiDBLite consensus disorder prediction 60 96 - -
Mal2g2841 397 MobiDBLite consensus disorder prediction 247 266 - -
Mal2g2841 397 Pfam Protein of unknown function (DUF1117) 273 373 IPR010543 -
Mal2g2841 397 MobiDBLite consensus disorder prediction 356 397 - -
Mal2g2841 397 CDD RING-H2_RNF126_like 197 238 - -
Mal2g2841 397 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 161 244 IPR013083 -
Mal2g2841 397 MobiDBLite consensus disorder prediction 62 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2841 Mal-Chr2 37617127 37618320 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2841 171 246 C3H Transcription Factor Family AT1G26800 52.632 3.14e-23 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2841 - K11982 gmx:100807324 548.51