Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2838 ATGGCAAAAACACTCTTGCATCTTCTATGCATCATCATGATCCTTCTAGTATCAAATACCTTAAAATCTCATTCTCAGCAAGAGGACTTTTTCTTTGCTGGATTCAATGAAGCTACCACCAACATAACCTTAAATGGAGGTGCAGTGATTGAACACAAAGGCACACTTCGTTTAACAAATGACACTGAAAGAGTACTTGGTCATGCTTTTTATTCCAACCCAATCAACTTCAAAAACAACTCCAACAAAACCAAAGTTTTTTCCTTTTCAACTTCTTTTGCTTTTGCAATAGTTCCACAATATCCAAAACTAGGAGGACATGGTTTTGCCTTCACCATTTCACCTTCCAAAAACCTTTCCAATGGCTATCCAAGTCAGTACTTAGGCCTTCTCAACCCAAAAGATTTAGGTAACTTTTCAAACCACTTATTCGCAGTTGAATTCGACACGGTACAAGATTTCGAATTCAATGACATCAATGACAACCATGTTGGTATCAACTTGAACAACATGGTATCAAACAAATCAGTTAAAGCATGTTTTTTTACTGATGGGTCAATGAATAAACAAGTTCAAGACCTTAACTTGAAGAGTGGTAGTGTGATTCAAGCATGGATCGACTATGATTCCTCAAGGAACATTCTTGAAGTTAGACTCTCACCAACTTCATCAAAACCAAGTTCACCAATCTTATCATACCAAGTAGATCTAACACCAATTTTCAAAGAAACTATGTATGTTGGGTTTTCTTCTTCAACAGGGTTACTATCTGGCTCACACTATATATTGGGTTGGAGCTTCAAAATCAACGGAGAAGCCAAAACTTTGTCTTTGAAAAATCTTCCTTCACTCTCTTCAAATACCAATAACAGTACCAAGTCCTTAATCTTGGGTCTCTCTATTTCATTTGTGATTCTAATAGCTATAACAACTGGTTTAGCTTTTTACTTAAAGATGAAAAACGATGATGTTATAGAAGCTTGGGAACTAGAAGTGGGACCACATAGATTTCCTTACAAAGAACTGAAGCAAGCAACAAGAGGGTTCAAGGACAAGAACCTTCTTGGGTTTGGTGGTTTTGGTAAGGTTTACAAAGGGGTGTTACCAGATTCCAAAACTGAAATAGCTGTGAAACAAATCTCCCAAGAATCAAGACAAGGGTTGCAAGAGTTTATCTCAGAAATCGAAACCATTGGTAGACTTCGTCATAGGAACCTAGTACAGTTACTAGGTTGGTGTCGGAAGCGTAATGATTTAATCTTAGTGTATGATTTTATGAAAAATGGGAGTTTAGATAAGTATATATTTGAAAAACCAAGAGCTATGTTAAAGTGGGAAGAAAGGTTTAGGATCATAAAAGGTGTGGCTTCAGGGCTTGTTTATTTGCATGAGGAATGGGAACAAACGGTGATTCACAGAGATGTGAAAGCAGGGAATGTTCTTTTGGATTCTGAGATGAATGCAAGATTAGGTGATTTTGGTTTGGCTAAGCTTTATGATCATGGTGAGAATCCTACCACAACGAGGGTGGTGGGAACTTTGGGGTATTTAGCGCCCGAATTAACAAGAACAGGGAAACCAACAACGAGTTCTGATGTGTTTGCGTTTGGGGCGTTGTTGGAAGTGGTTTGTGGGAGAAGGCCTATTGAGCCGAAAGCGTTGCCAGAGGAGCTTGTTTTGGTGGGTTGGGTTTGGGATAGGTGGAGGCTAGGGACAGTTTTGGAAATTGTGGATCAGAAATTGGGTGGGGTTTATGATGAGATGGAGCTTTTGTTGGTGGTTCAGGTGGGGTTGTTGTGTTCTCATGATTCGCCGGAACAGAGGCCTACAATGAAGCAGGTGCTTAGGTACTTGGAAGGGGAGGTGCCATTGCCTCAGCCTCATGCTTTTGGTGCCAAAAAGGGCGGTGGCAAGTTTGAGGGAATGTATCCGATGTCGCCATCCTTTGAAAGTGTGAATACATGGTCGTCAACGGGTGGATATGGTTCGTCTCTTTCACTTTCCGGTGGCCGATAG 2016 0.4028 MAKTLLHLLCIIMILLVSNTLKSHSQQEDFFFAGFNEATTNITLNGGAVIEHKGTLRLTNDTERVLGHAFYSNPINFKNNSNKTKVFSFSTSFAFAIVPQYPKLGGHGFAFTISPSKNLSNGYPSQYLGLLNPKDLGNFSNHLFAVEFDTVQDFEFNDINDNHVGINLNNMVSNKSVKACFFTDGSMNKQVQDLNLKSGSVIQAWIDYDSSRNILEVRLSPTSSKPSSPILSYQVDLTPIFKETMYVGFSSSTGLLSGSHYILGWSFKINGEAKTLSLKNLPSLSSNTNNSTKSLILGLSISFVILIAITTGLAFYLKMKNDDVIEAWELEVGPHRFPYKELKQATRGFKDKNLLGFGGFGKVYKGVLPDSKTEIAVKQISQESRQGLQEFISEIETIGRLRHRNLVQLLGWCRKRNDLILVYDFMKNGSLDKYIFEKPRAMLKWEERFRIIKGVASGLVYLHEEWEQTVIHRDVKAGNVLLDSEMNARLGDFGLAKLYDHGENPTTTRVVGTLGYLAPELTRTGKPTTSSDVFAFGALLEVVCGRRPIEPKALPEELVLVGWVWDRWRLGTVLEIVDQKLGGVYDEMELLLVVQVGLLCSHDSPEQRPTMKQVLRYLEGEVPLPQPHAFGAKKGGGKFEGMYPMSPSFESVNTWSSTGGYGSSLSLSGGR* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2838 671 ProSitePatterns Protein kinases ATP-binding region signature. 355 378 IPR017441 GO:0005524
Mal2g2838 671 Gene3D Phosphorylase Kinase; domain 1 334 425 - -
Mal2g2838 671 CDD lectin_legume_LecRK_Arcelin_ConA 30 271 IPR001220 GO:0030246
Mal2g2838 671 Pfam Legume lectin domain 28 281 IPR001220 GO:0030246
Mal2g2838 671 Gene3D Transferase(Phosphotransferase) domain 1 426 630 - -
Mal2g2838 671 PANTHER - 6 671 - -
Mal2g2838 671 ProSiteProfiles Protein kinase domain profile. 349 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g2838 671 SUPERFAMILY Concanavalin A-like lectins/glucanases 29 284 IPR013320 -
Mal2g2838 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
Mal2g2838 671 Gene3D - 26 270 - -
Mal2g2838 671 CDD STKc_IRAK 355 620 - -
Mal2g2838 671 PANTHER L-TYPE LECTIN-DOMAIN RECEPTOR KINASE IV.2-LIKE PROTEIN 6 671 - -
Mal2g2838 671 SUPERFAMILY Protein kinase-like (PK-like) 331 625 IPR011009 -
Mal2g2838 671 Pfam Protein kinase domain 349 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g2838 671 SMART serkin_6 349 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2838 Mal-Chr2 37578702 37580717 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2838 28 626 Receptor kinase-like Gene Family AT3G55550 60.461 0.0 746
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mal2g2838 Pkinase 2.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2838 - - gmx:100787552 895.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g2006 3 82243221 82245272 Mal2g2838 2 37578702 37580717 ECH
Mal2g2838 2 37578702 37580717 Mal2g2838 2 37578702 37580717 ECH