Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2829 ATGGAGGATACTCAAAATATGATGTGGATGAAAAGGAAACAAATCTTGCACTCACATAATGAAGCAGTGCCATCATTTGGAACCATCAACAACAATTCTTGGGAAGAAAAAGCTTTTGCAGAAGATGCAGCTAGGATACTTGGTGGATGTATATGGCCTCCAAGATCTTACTCATGCCACTTTTGTAAAAGAGAGTTCAGGTCTGCTCAAGCTTTAGGTGGTCACATGAATGTCCATAGAAGAGATAGAGCTAAGCTCAAACAAAGTCTTAGCCACCATAATGAATTAGACTTTCATTCTCATCACAAAAATCATTTTACAACAAGCAGAGTTAAATCTTCTTCTTGGCCCTCAACTATATCTACACAAGAAAACTGTTTTCAGTCAAACATGTCTTCATATTCTTCTTCAATTGGATGGGGGAATAACCACATGGATTCTGAACAAAAAGGGCTAGCTAATGCAAGGGAACAAATTTTCAAAGGTTATAGTTGTAATTGTAATGATTATGTTGAAACAAGTTTGTCTATGGGACAAAATAATTCAATGTTTGGCCAAAAATTGCAAACTGAACATGATGATTTATGTGGTGGGGACAAAGGCATAAATTATAAAAGACCAAAAACAGCTTCTATTTCTTCTTCAATGCCTGTCTTGCTCAAGCCATGTTTGAATGAAAGATGTTTAACTTTTCAGTCTGCAGAGTTTGTAATTGGAATTAAGCCTGGAATGGAAGACTTGGATCTTGAGCTCAGGCTAGGGAAATTAACACAGAAAGTTTAG 783 0.364 MEDTQNMMWMKRKQILHSHNEAVPSFGTINNNSWEEKAFAEDAARILGGCIWPPRSYSCHFCKREFRSAQALGGHMNVHRRDRAKLKQSLSHHNELDFHSHHKNHFTTSRVKSSSWPSTISTQENCFQSNMSSYSSSIGWGNNHMDSEQKGLANAREQIFKGYSCNCNDYVETSLSMGQNNSMFGQKLQTEHDDLCGGDKGINYKRPKTASISSSMPVLLKPCLNERCLTFQSAEFVIGIKPGMEDLDLELRLGKLTQKV* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2829 260 Pfam C2H2-type zinc finger 57 81 - -
Mal2g2829 260 ProSiteProfiles Zinc finger C2H2 type domain profile. 57 84 IPR013087 -
Mal2g2829 260 SUPERFAMILY beta-beta-alpha zinc fingers 54 84 IPR036236 -
Mal2g2829 260 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 260 - -
Mal2g2829 260 PANTHER OS07G0101800 PROTEIN 1 260 - -
Mal2g2829 260 ProSitePatterns Zinc finger C2H2 type domain signature. 59 79 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2829 Mal-Chr2 37379360 37380302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2829 32 89 C2H2 Transcription Factor Family AT2G37740 74.138 6.14e-25 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal2g2829 zf-C2H2_6 4e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2829 - - aprc:113851273 327.405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g2829 2 37379360 37380302 Mal8g1300 8 24209246 24209902 PCT