Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2816 ATGGCTCCTCCTTCAGATATTAACCATCTTTCTCACCCTTGCATATATGCAGGGGACTTTTCTTCTTCATACTCAGATAGAAAGCCTGGTTTTATGAAATGGTTTGGCAAGATTTTCAAAATTGGGTCAAATAGAGGAAGGGGTGATGGTCATCTTCTACAGCAACCCGTAGACGAAAACATGGCTTGGCGAGTTCCACCTAGATCCTTGGATAACCGTGCTAGATCTAAGAAGGAGGAAGAGGATTTAAACAATGCAATTGCACTTTCTTTAAGTGAAGATTTAAAGATACCAACAGGATATAGATGGCGAACGGGAACTGATGATGATTATGCAAAAGCACTCCAGGATCGCATGCACTCATCTCTACACCCTCCATTGGCCCCTTTACCTTTTTATCCCCGCGGATACAGCATGCCATCGCATAACAGAATATGTGGAGGGTGCAACAAGGAGATACTCTACGGTAATTGTTTGGGAGTTGAACATAGTTATTTTCATCCAGACTGCTTTCGGTGTCACTCTTGCCATCATCCTATTACCGAGCGTGAGTTTTCCTTGTCAGGGAAGCATCCATATCACAAGTATTGTTTTAAAGAATTGAGCCATCCTAAATGTGAAGTTTGCCATCATTATATACCTATAAATGGTTCTGGTTTGATTGAGTATAGGTGTCACCCCTATTGGAACCAAAAATATTGTCCATCTCATGAATATGATAATACAGCTCGCTGTTGTAGCTGTGAAAGATTAGAGTCTCGGGGCGAAAGATACTTTAGATTGGATGATGGACGGATTTTATGCTTCGAATGCATGGAATCTGCTATAACAGATACTGGTGAATGTCAACCTCTTTATCATTCTATTAGAGACTATTATGAAGGAATGAATATGAGAATCGATCAACAAATCCCCATGCTTCTGGTTGGGAGAGAAGCACTTAATGAAGCAATTGTTGGAGAGAAGAATGGTTTCCACCACCTGCCAGAAACAAGAGGGTTATGCCTCTCGGAAGAACAGACTGTCACCAGTGTACATAGATGGTCAAAAAATGGAGGTCATCGATTAATAGGGATGCGAAGTCAACCTCAAAAGTTGATCAGAAAATGTGAAGTTACAGCTATTCTTGTTCTCTATGGTCTTCCGAGGTTACTCACAGGTGCTATCCTTGCCCATGAGTTGATGCACGGTTGGTTACGCCTTAAAGGTTACCGCAATCTTGATCCTGCAGTAGAGGAAGGTATTTGTCAGGTTCTTTCATACATGTGGCTTGACGCAGAAGTTATGTCAGGTTCTAGAACCATGCCATCAACATCAGCAGCAGCTTCTTCCTCCTCCTCCTCTTCCTACTCGTCAAAGAAAGGTGCGATATCAAAAGTTGAGAATAAATTGGGTGAATTTTTCATGAACCAGATTGCCAATGATTCTTCCCCAGCTTATGGTGGAGGCTTTAGATCAGCTAATGCAGCTGTTAATAAATATGGTTTACGTTGTACTCTCGACCATATTCGTTTGACTGGTCAGTTCCCACTGTAA 1536 0.4173 MAPPSDINHLSHPCIYAGDFSSSYSDRKPGFMKWFGKIFKIGSNRGRGDGHLLQQPVDENMAWRVPPRSLDNRARSKKEEEDLNNAIALSLSEDLKIPTGYRWRTGTDDDYAKALQDRMHSSLHPPLAPLPFYPRGYSMPSHNRICGGCNKEILYGNCLGVEHSYFHPDCFRCHSCHHPITEREFSLSGKHPYHKYCFKELSHPKCEVCHHYIPINGSGLIEYRCHPYWNQKYCPSHEYDNTARCCSCERLESRGERYFRLDDGRILCFECMESAITDTGECQPLYHSIRDYYEGMNMRIDQQIPMLLVGREALNEAIVGEKNGFHHLPETRGLCLSEEQTVTSVHRWSKNGGHRLIGMRSQPQKLIRKCEVTAILVLYGLPRLLTGAILAHELMHGWLRLKGYRNLDPAVEEGICQVLSYMWLDAEVMSGSRTMPSTSAAASSSSSSSYSSKKGAISKVENKLGEFFMNQIANDSSPAYGGGFRSANAAVNKYGLRCTLDHIRLTGQFPL* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2816 511 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 172 237 - -
Mal2g2816 511 ProSitePatterns LIM zinc-binding domain signature. 146 180 IPR001781 -
Mal2g2816 511 Pfam LIM domain 146 199 IPR001781 -
Mal2g2816 511 Pfam Protein DA1 295 506 IPR022087 -
Mal2g2816 511 PANTHER TRANSCRIPTION FACTOR INTERACTOR AND REGULATOR LIM FAMILY-RELATED 21 511 - -
Mal2g2816 511 Gene3D Cysteine Rich Protein 141 203 - -
Mal2g2816 511 PANTHER PROTEIN DA1-RELATED 2 21 511 IPR045218 -
Mal2g2816 511 CDD LIM 173 228 - -
Mal2g2816 511 CDD LIM_DA1 146 198 - -
Mal2g2816 511 ProSiteProfiles LIM domain profile. 144 204 IPR001781 -
Mal2g2816 511 SMART lim_4 145 197 IPR001781 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2816 Mal-Chr2 37133296 37137405 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mal2g2816 DA1-like 1.8e-95 CL0126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2816 - - gmx:100793901 909.442