Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2778 ATGATCTCTGCCTCCCGAACCCATGACATGAAGATTCTCAACTCGAATACCATCGGAGATGTCGTTCACGACAAGTCTCACGTTGTTGTTGTTGTCGTGGACAACATCGAAAATGCATCACCTCGGAACTCTACCGCGGAGAATGTTGGAGTCCGTGAGAAAGAGAGAGTGTCCTCTGTATCTGATTCTGATCAGTGTTGTGTGGATTTGGATCTGGAAAGTGTGGTTGTTGATGATGATGATAATGTGAAGATGGATTGTAGGATTTGCCAACTCAGCATGGATATGAAAAACCATGATGATGACCAACATGAATCTGGGACTCCCATTGAACTAGGATGTTCTTGCAAAGATGATTTGGCTGCTGCCCATAAACAATGTGCTGAAGCTTGGTTCAAGATCAAGGGTAACAAAACTTGTGAAATCTGTGGATCCATTGCTAGCAATGTAGCTGGTATAGTTGAAGTTGAAATGACAGAACAGTGGAATGAAGCTAATGATGCAACCATTCTACCACGAACTGGACCTTCCCAACCGGCAGAAACTCATCGCTTAATCCACCGGTTCTTGAATTTCCTCCTTGCCTGTATGGTCATTGCCTTTGTCCTACCCTGGCTTTTTCACTTCTATTTGCGTTCCTGA 642 0.4408 MISASRTHDMKILNSNTIGDVVHDKSHVVVVVVDNIENASPRNSTAENVGVREKERVSSVSDSDQCCVDLDLESVVVDDDDNVKMDCRICQLSMDMKNHDDDQHESGTPIELGCSCKDDLAAAHKQCAEAWFKIKGNKTCEICGSIASNVAGIVEVEMTEQWNEANDATILPRTGPSQPAETHRLIHRFLNFLLACMVIAFVLPWLFHFYLRS* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2778 213 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 38 212 - -
Mal2g2778 213 PANTHER ZINC FINGER, RING-CH-TYPE 38 212 - -
Mal2g2778 213 Pfam RING-variant domain 87 143 IPR011016 GO:0008270
Mal2g2778 213 SMART ringv_2 86 144 IPR011016 GO:0008270
Mal2g2778 213 ProSiteProfiles Zinc finger RING-CH-type profile. 79 150 IPR011016 GO:0008270
Mal2g2778 213 SUPERFAMILY RING/U-box 83 145 - -
Mal2g2778 213 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 73 151 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2778 Mal-Chr2 36520866 36523345 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2778 38 213 C3H Transcription Factor Family AT5G05830 51.613 8.49e-51 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2778 - - gmx:100818979 206.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g2778 2 36520866 36523345 Mal8g1186 8 18423107 18425253 ECH
Mal3g2108 3 87165814 87168900 Mal2g2778 2 36520866 36523345 ECH
Mal2g2778 2 36520866 36523345 Mal2g2778 2 36520866 36523345 ECH