Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2777 ATGATCTCTTCCTCCCAAAGCCATGACATGAAGATTCTCAACTTTAGTACCATCAGAGATGTCGTCACCACCGGAGGACGACAAGAAAAGTCTCACGTTGTCGACGTCGACAACATTCAAAATGCTTCTCCCCGGAACTCTACGGGAGATGAGAAAGGGAGTGTGTCCTCTGTGTATGAATGTTGTGTGGATTTGGATCTGGAGAGTGTGGTTGATGTTGATGATAATGTGAAGAGGGATTGTAGGATTTGCCATCTCAGCATGGATATGAAAAACCATGATGATGACAATAATGAATTTGGGACTCCCATTGAATTAGGATGTTCTTGCAAAGATGATTTGGCTGCTGCCCATAAACAATGTGCTGAAGCTTGGTTCAAGATCAAGGGTAACAAAACTTGTGAAATCTGTGGATCCATTCCTAGTAATGTAGCTGGTATAGTTGAAGTTGAAATGAAAGAACAGTGGTATGAAGCTAATAACACCTTCATGCTACCACCAACTGGACCTTCCTCGCCGGCTGAAACACCTTCATTTCTACTCAACTTTTTGTTGAACTGCTTCCTTGCCAGCTTCTTGACCATCTTCTGGACCATGGTCTCTTGCTTTTTCCTGTATTGGTTTTTTATAGCTAAGAAAGATAATTGA 648 0.4198 MISSSQSHDMKILNFSTIRDVVTTGGRQEKSHVVDVDNIQNASPRNSTGDEKGSVSSVYECCVDLDLESVVDVDDNVKRDCRICHLSMDMKNHDDDNNEFGTPIELGCSCKDDLAAAHKQCAEAWFKIKGNKTCEICGSIPSNVAGIVEVEMKEQWYEANNTFMLPPTGPSSPAETPSFLLNFLLNCFLASFLTIFWTMVSCFFLYWFFIAKKDN* 216
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2777 215 Pfam RING-variant domain 81 137 IPR011016 GO:0008270
Mal2g2777 215 ProSiteProfiles Zinc finger RING-CH-type profile. 73 144 IPR011016 GO:0008270
Mal2g2777 215 SUPERFAMILY RING/U-box 75 139 - -
Mal2g2777 215 MobiDBLite consensus disorder prediction 35 54 - -
Mal2g2777 215 MobiDBLite consensus disorder prediction 26 54 - -
Mal2g2777 215 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 27 197 - -
Mal2g2777 215 SMART ringv_2 80 138 IPR011016 GO:0008270
Mal2g2777 215 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 67 144 IPR013083 -
Mal2g2777 215 PANTHER ZINC FINGER, RING-CH-TYPE 27 197 - -
Mal2g2777 215 CDD RING_CH-C4HC3_MARCH 81 138 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mal2g2777 Mal-Chr2 36516563 36518481 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2777 41 209 C3H Transcription Factor Family AT5G05830 45.789 1.09e-39 133
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2777 - - mtr:MTR_3g069760 244.973