Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mal2g2777 | ATGATCTCTTCCTCCCAAAGCCATGACATGAAGATTCTCAACTTTAGTACCATCAGAGATGTCGTCACCACCGGAGGACGACAAGAAAAGTCTCACGTTGTCGACGTCGACAACATTCAAAATGCTTCTCCCCGGAACTCTACGGGAGATGAGAAAGGGAGTGTGTCCTCTGTGTATGAATGTTGTGTGGATTTGGATCTGGAGAGTGTGGTTGATGTTGATGATAATGTGAAGAGGGATTGTAGGATTTGCCATCTCAGCATGGATATGAAAAACCATGATGATGACAATAATGAATTTGGGACTCCCATTGAATTAGGATGTTCTTGCAAAGATGATTTGGCTGCTGCCCATAAACAATGTGCTGAAGCTTGGTTCAAGATCAAGGGTAACAAAACTTGTGAAATCTGTGGATCCATTCCTAGTAATGTAGCTGGTATAGTTGAAGTTGAAATGAAAGAACAGTGGTATGAAGCTAATAACACCTTCATGCTACCACCAACTGGACCTTCCTCGCCGGCTGAAACACCTTCATTTCTACTCAACTTTTTGTTGAACTGCTTCCTTGCCAGCTTCTTGACCATCTTCTGGACCATGGTCTCTTGCTTTTTCCTGTATTGGTTTTTTATAGCTAAGAAAGATAATTGA | 648 | 0.4198 | MISSSQSHDMKILNFSTIRDVVTTGGRQEKSHVVDVDNIQNASPRNSTGDEKGSVSSVYECCVDLDLESVVDVDDNVKRDCRICHLSMDMKNHDDDNNEFGTPIELGCSCKDDLAAAHKQCAEAWFKIKGNKTCEICGSIPSNVAGIVEVEMKEQWYEANNTFMLPPTGPSSPAETPSFLLNFLLNCFLASFLTIFWTMVSCFFLYWFFIAKKDN* | 216 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mal2g2777 | 215 | Pfam | RING-variant domain | 81 | 137 | IPR011016 | GO:0008270 | |
Mal2g2777 | 215 | ProSiteProfiles | Zinc finger RING-CH-type profile. | 73 | 144 | IPR011016 | GO:0008270 | |
Mal2g2777 | 215 | SUPERFAMILY | RING/U-box | 75 | 139 | - | - | |
Mal2g2777 | 215 | MobiDBLite | consensus disorder prediction | 35 | 54 | - | - | |
Mal2g2777 | 215 | MobiDBLite | consensus disorder prediction | 26 | 54 | - | - | |
Mal2g2777 | 215 | PANTHER | RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN | 27 | 197 | - | - | |
Mal2g2777 | 215 | SMART | ringv_2 | 80 | 138 | IPR011016 | GO:0008270 | |
Mal2g2777 | 215 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 67 | 144 | IPR013083 | - | |
Mal2g2777 | 215 | PANTHER | ZINC FINGER, RING-CH-TYPE | 27 | 197 | - | - | |
Mal2g2777 | 215 | CDD | RING_CH-C4HC3_MARCH | 81 | 138 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mal2g2777 | Mal-Chr2 | 36516563 | 36518481 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mal2g2777 | 41 | 209 | C3H Transcription Factor Family | AT5G05830 | 45.789 | 1.09e-39 | 133 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mal2g2777 | - | - | mtr:MTR_3g069760 | 244.973 |