Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2719 ATGGCTAATCTTATTAAGTTTTCTCCAATTTCTGAAATCTCCAGTCAAAAAACATTTTGGAACCTTAAGGGCAAAGTCATTCGTTTGTGGCGTGTATCAGATTTTAACAAAAGCACTCTGCCATTTTCAATTGAAATGGTTTTACTTGATGACGCTGGTAACAAGATTCACGCCTCAATTAAGAAAACTTTACTTTACAAATTCAAAAACGAGATTTTTGAAGGAAAATGTTACAGCTTTGAAAACCTTGGTGTAGCTATTAATGGTGGGAGCTACAGAACTACAAGACACAGTTACAAACTGAATTTTCAGTTTACTACCAAGGTTCAATATCTCCCAAATCTGAAAATCATTAGGTCTCCTTACAACTTAATACCAATATCTGAAATTGTTGGTGGAAGTTTTGATTTTGACTATTTGCCTGTTATTTTGTTAATGTTTATTTATTCAGACCTGATTGGTGTTCTTTCTGGAGTGGGTACTGAAAGGGAATTGGAAAGGAATGGTAGCATTACAAAGTTGAATGTTATTGAACTTGAAGCAGAAGGGCATAAGATACAATGTACCGTGTTTGGAAGCTATGTTGACGAGCTTAATAGTTTCATTGCAAGTGGAGAGAACCAAAATGCTATTGTCATTGTTCAGCTGGCCAAAGCCAAGACATTTCAAGATAAAATACATTTGCAGAATTGTCTAAATTGCACAAAACTGGTTTTCAACCCTACTTGCCCTGATGGTATAAGCTTTAGGAACAGGCTTGCTGAAATTGTGGACACACCTTCACCCCTTACTTTAACACAATTGCAACCTCAACAAAGGGTTGAACCTAGGGATGACTTTCTCTTTAATACACAAAGAAGAACAATGCAAGGGCTTAAGGATTCATCCACTGACTCTGTCTTTGTTGTTATTGGTACAGTAGAGAGGATTGTGAATCAAGACAACTTTTGGTACACCGCCTGCATATGCTCTAAAGCTGTCATACCTGACTCCCAAATGTTTTTTTGTGAGAAATGTGACAAGCACGTGAAGAAGGTTTTTCCTAGGTATTGCTTAAAGATTAGAGCTATTGACCACACTGACTGTGCTACTCTGGTCATCTTTGACAAAGAATGCTCATCTCTTTTTAACAAAAGCTGTGCTGACATGCTTTCTCAACATGAGCAGGCTGTATCTGAGGGTCAGCTTCCTCCTCCGATGCATGCACTTATTGGGCAAACATATCTTTTCAAAGTTGAGACAAAGGCTAATTTTAGTCCAAGATATGAAAGATCATTTCGTGTGAAAAAGATTTGTGTTGACCCTGTTGTGATTAATGAGTTTAAGGTTAAGTGGGACCATGAAGAGGCTTTATTTGCCAAACATGCAAATGAAAGTGCATCTCTAAGTTCATTGATAGACAAGGGAAAAGTAGGAGGGTTTGAGGGTTGTTCAAGTATGCTATCTCAGGAACCTATCTCATTATCTGACAATGTTGACAAAGGAAAGGGAAAAACTTTGGCTGTTTGTTCTGAAATTGTTGCAGAGGATTTGATGCCTAAATTTGCAGGAGTTGTTTCTGAACCTGAGGTCAAAGAAGTAATCCCTAAAGCTTCTGATTCATCAACTAAAAGAGAATCTCCTACCAGCATTGATGAGGACATGAACATGCCTCTAAAGCTGCTTAGGAGGAGTGTGAAGATAGAAAAGCTTTAG 1695 0.3776 MANLIKFSPISEISSQKTFWNLKGKVIRLWRVSDFNKSTLPFSIEMVLLDDAGNKIHASIKKTLLYKFKNEIFEGKCYSFENLGVAINGGSYRTTRHSYKLNFQFTTKVQYLPNLKIIRSPYNLIPISEIVGGSFDFDYLPVILLMFIYSDLIGVLSGVGTERELERNGSITKLNVIELEAEGHKIQCTVFGSYVDELNSFIASGENQNAIVIVQLAKAKTFQDKIHLQNCLNCTKLVFNPTCPDGISFRNRLAEIVDTPSPLTLTQLQPQQRVEPRDDFLFNTQRRTMQGLKDSSTDSVFVVIGTVERIVNQDNFWYTACICSKAVIPDSQMFFCEKCDKHVKKVFPRYCLKIRAIDHTDCATLVIFDKECSSLFNKSCADMLSQHEQAVSEGQLPPPMHALIGQTYLFKVETKANFSPRYERSFRVKKICVDPVVINEFKVKWDHEEALFAKHANESASLSSLIDKGKVGGFEGCSSMLSQEPISLSDNVDKGKGKTLAVCSEIVAEDLMPKFAGVVSEPEVKEVIPKASDSSTKRESPTSIDEDMNMPLKLLRRSVKIEKL* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2719 564 PANTHER REPLICATION FACTOR A 1, RFA1 24 384 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Mal2g2719 564 Gene3D - 279 440 IPR012340 -
Mal2g2719 564 Gene3D - 116 259 IPR012340 -
Mal2g2719 564 MobiDBLite consensus disorder prediction 527 549 - -
Mal2g2719 564 CDD RPA1_DBD_A_like 22 109 - -
Mal2g2719 564 SUPERFAMILY Nucleic acid-binding proteins 148 253 IPR012340 -
Mal2g2719 564 SUPERFAMILY Nucleic acid-binding proteins 6 115 IPR012340 -
Mal2g2719 564 Gene3D - 5 111 IPR012340 -
Mal2g2719 564 Pfam Domain of unknown function DUF223 45 139 IPR003871 -
Mal2g2719 564 CDD RPA1_DBD_C 295 431 IPR013955 -
Mal2g2719 564 CDD RPA1_DBD_B_like 151 245 - -
Mal2g2719 564 SUPERFAMILY Nucleic acid-binding proteins 291 437 IPR012340 -
Mal2g2719 564 Pfam Replication factor-A C terminal domain 301 420 IPR013955 -
Mal2g2719 564 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 24 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2719 Mal-Chr2 35337695 35340388 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2719 9 368 Core DNA Replication Machinery Family AT2G06510 20.844 2.25e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2719 - - mtr:MTR_4g036240 619.002