Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2706 ATGCGACCACAACACAACCTCCTAACCTTAACAATTACCTTGTTGTGTTCATGGAGCTTAACAAAAGCTGACCCTGAAACACGTTTGATCAACAAAGGTTGTAACCAATACAACGCAACAAACTTATCCAATTTCTATCAAAATCTAAACGCAACTTTATCAGACTTTGAAATCACAACTAGGGGAGCAAACCCTGTTTATGCTTTGTTTCAGTGTAGGAATCATCTCTCTAATTCTGATTGTGCCGCGTGCCTCGCCGTCGCCGCCGCACAAATTCGGAATTGCTCCGCTGGTTCCAAAGGTGCTCGTGTTATTTATGATGGTTGCTTCCTTGGGTATGAGAGCAATGGATTCTTCGACCAAACAACTCTACCTGGAAACAATATGATTTATGGAAGTCAAACAGCAAATGGAGAAACTGCTTTTAATGCAGCTGCACAACAAGTGTTAGAGGATCTACAAACATCAACACCCAAAATTATGTTAGAACTTATCTCTACTAAGACACCTGTGGCTGGAACTGGAAATGCAATCTATGCTATAACACAATGTGCTAAAACAGTCACTGAAAGTGGTTGTTTGGATTGCTTGACAGTTGGATTCAATAACATACAAAGTTGTTTTCCTAATACAGATGGTATAGCATTTGATGTTGGTTGTTTTATGAGATACTCGGAGAAATCATTTTTTGGTGATAACCAGACCATTGATATCACACCCTTCTTAAAAAAAGGAGGTTCAAGTAAGAAAGGGGCCATTATTGGTGGGGTTGTGGGAGGTGTAGCCCTTGTTGTGATCCTCCTTGCACTGTTTGTTTGGTTTAGGCACAACAAGAAACCCAAGAGACTCCCTAGAGGTGACATATTGGGAGCAACTGAGTTGAAAGGTCCAGTTACTTACAAATATAAAGATTTGAAGTCAGGCACTCTGAAAAATGGTAAAGTAGTTGCTGTCAAGAAACTGATTCTAGGAAACTCCGGCAAGAAGGATGAACAATTTGAAAGTGAAGTGAAGCTCATAAGTAATGTTCATCATAAGAATCTAGTTCGGCTTCTCGGATGTTGCAGTAAAGGCCAAGAGAGAATCCTTGTTTATGAATACATGGCCAACAACAGCCTTGACAGATTCTTATCTGGTGAAAATAAGGGCTCCCTCATTTGGATTCAAAGGTATGATATAACAGCAAGAGGTCTATCCTATCTGCATGAAGATTTCCACGTTTGCATCATACATAGGGATATAAAGACTAGCAATATCCTTCTAGATGATGATCAATCTCATCCGCTCGAGGAAGATAGACACTTGGATTTGGTTGACAAGACATTGAACCCTAGTGACTATGATGCAGAAGAAGTGAAGAAAGTTATAGAGATTGCTTTGCTTTGCACTCAAGCAACAGCTGCTACAAGGCCAACTATGTCTGAAATAGTAGTCCTACTCAAAAGCAAGTTTGTGGAGAATATGAAACCAACCATGCCTGTCTTTGTTAACTCTAACTTGAGGCCTCAGATGGATACCTCTACCTCAATAGCTTCCTCTACATCTAATGCTACTGCTGCCACTTCTATACTATCAGCTAGATGA 1584 0.4021 MRPQHNLLTLTITLLCSWSLTKADPETRLINKGCNQYNATNLSNFYQNLNATLSDFEITTRGANPVYALFQCRNHLSNSDCAACLAVAAAQIRNCSAGSKGARVIYDGCFLGYESNGFFDQTTLPGNNMIYGSQTANGETAFNAAAQQVLEDLQTSTPKIMLELISTKTPVAGTGNAIYAITQCAKTVTESGCLDCLTVGFNNIQSCFPNTDGIAFDVGCFMRYSEKSFFGDNQTIDITPFLKKGGSSKKGAIIGGVVGGVALVVILLALFVWFRHNKKPKRLPRGDILGATELKGPVTYKYKDLKSGTLKNGKVVAVKKLILGNSGKKDEQFESEVKLISNVHHKNLVRLLGCCSKGQERILVYEYMANNSLDRFLSGENKGSLIWIQRYDITARGLSYLHEDFHVCIIHRDIKTSNILLDDDQSHPLEEDRHLDLVDKTLNPSDYDAEEVKKVIEIALLCTQATAATRPTMSEIVVLLKSKFVENMKPTMPVFVNSNLRPQMDTSTSIASSTSNATAATSILSAR* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2706 527 ProSitePatterns Serine/Threonine protein kinases active-site signature. 409 421 IPR008271 GO:0004672|GO:0006468
Mal2g2706 527 Gene3D Phosphorylase Kinase; domain 1 298 368 - -
Mal2g2706 527 Gene3D Transferase(Phosphotransferase) domain 1 427 496 - -
Mal2g2706 527 Pfam Protein kinase domain 311 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g2706 527 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 22 309 - -
Mal2g2706 527 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 309 425 - -
Mal2g2706 527 ProSiteProfiles Protein kinase domain profile. 274 527 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g2706 527 ProSiteProfiles Gnk2-homologous domain profile. 11 118 IPR002902 -
Mal2g2706 527 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 435 523 - -
Mal2g2706 527 ProSiteProfiles Gnk2-homologous domain profile. 124 229 IPR002902 -
Mal2g2706 527 Gene3D Transferase(Phosphotransferase) domain 1 369 426 - -
Mal2g2706 527 SMART serkin_6 302 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g2706 527 Pfam Salt stress response/antifungal 34 115 IPR002902 -
Mal2g2706 527 Pfam Salt stress response/antifungal 136 226 IPR002902 -
Mal2g2706 527 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 435 523 - -
Mal2g2706 527 SUPERFAMILY Protein kinase-like (PK-like) 308 495 IPR011009 -
Mal2g2706 527 Gene3D - 26 118 IPR038408 -
Mal2g2706 527 Gene3D - 127 229 IPR038408 -
Mal2g2706 527 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 22 309 - -
Mal2g2706 527 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 309 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2706 Mal-Chr2 35151996 35179030 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2706 66 423 Receptor kinase-like Gene Family AT5G40380 35.787 1.57e-59 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal2g2706 Pkinase 1.9e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2706 - - lja:Lj6g3v0353760.1 603.594