Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2697 ATGAGTATGGAAAAAAACTACAATGATTCTTCTGAGTGGCAGCATTTGAGCACAAATTGGTCTCAATACAGTAGTGATCATTCACACTTTCCTGTTGTGACTGTACCTACACAGATTCTACCTCATAATATCTCTGACTCTTCTTCTGCTTCTTTTCAATATAGTGAGTTTCAGTCATGGAATTTACCCTTTGAAGGTAGTGTTGAAGATAGAGCAACAAGTGCTTCCAAGAGTCATAGTCAAGCAGAGAAAAGACGCAGAGATAGAATCAATACACAGCTTGCTAATCTTAGAAAACTTATTCCTAAGTCTGATAAGATGGACAAAGCAGCTTTACTAGGGAGTGTGATAGATCAAGTCAAAGATCTAAAGCGAAAAGCAATGGAAGTTAGCAGATTCATCACAGTTCCAACTGAAACTGATGAAGTATCAATAGACTACAACCATGTTGTTGAAGATGAAACCAGCACTAACAAAGTGAACAAATTCAAGGACAATATCATCATCAAAGCTTCCGTTTGTTGCGACGATCGACCGGAACTGTTCTCTGAACTAATCCAAGTCTTCAAAGGCTTAAGATTAACAACAGTTAAAGCTGACATAGCAAGTGTTGGTGGAAGGATCAAAAGTATATTGGTGCTTTGTTCAAAGGATAGTGAAGAAAATGTTTGCATTAATACTCTCAAACAGTCCCTTAAATCAGCAGTGACCAAAATTGCTTCATCATCTATGGTATCTAATTGTCCTACAAGAAGTAAGAGGCAGAGGTTCTTTTTGCCTTCTCATTTCATATAG 795 0.3736 MSMEKNYNDSSEWQHLSTNWSQYSSDHSHFPVVTVPTQILPHNISDSSSASFQYSEFQSWNLPFEGSVEDRATSASKSHSQAEKRRRDRINTQLANLRKLIPKSDKMDKAALLGSVIDQVKDLKRKAMEVSRFITVPTETDEVSIDYNHVVEDETSTNKVNKFKDNIIIKASVCCDDRPELFSELIQVFKGLRLTTVKADIASVGGRIKSILVLCSKDSEENVCINTLKQSLKSAVTKIASSSMVSNCPTRSKRQRFFLPSHFI* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2697 264 CDD bHLH_AtAIG1_like 69 146 - -
Mal2g2697 264 Pfam Helix-loop-helix DNA-binding domain 77 123 IPR011598 GO:0046983
Mal2g2697 264 PANTHER TRANSCRIPTION FACTOR BHLH30 27 263 IPR045847 GO:0003700|GO:0006355
Mal2g2697 264 PANTHER TRANSCRIPTION FACTOR BHLH51 27 263 - -
Mal2g2697 264 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 74 129 IPR036638 GO:0046983
Mal2g2697 264 Gene3D - 68 132 IPR036638 GO:0046983
Mal2g2697 264 CDD ACT_UUR-ACR-like 172 207 - -
Mal2g2697 264 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 74 123 IPR011598 GO:0046983
Mal2g2697 264 SMART finulus 80 129 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2697 Mal-Chr2 35000829 35002250 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2697 3 263 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G40200 43.929 2.65e-54 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal2g2697 HLH 1.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2697 - - gmx:100799687 367.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g2697 2 35000829 35002250 Mal2g2697 2 35000829 35002250 ECH