Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2692 ATGTCAAGCCCTAATTCTCGATCATTGAACTGGCACTACACAGAGCTAGATGATAGAGACCTTGAAATCAGAGGCAGAACACTCTTCTTCGTTATAGTACTCTTCTCCATTTTCCTTCTAGTCATCGTTCTCTTCTTCTACACACGTTGGGTCTGCCGCTACCACACTCACATAACCACAACCTACTCCGCCTCCATCCACGCGCCGCCACCAGCTCAGCCACAAGGACTAAACCCTGCTGCAATCAAGAAACTGCCCATTATCCTTCATCAAGCTCCGACCGACCCCGAAAGCGGCGCGTGGGAAGAGACGGAGTGTTGTATCTGTCTTGGAGAGTTTAAAGACGGTGAGAAATTGAAGGTTTTACCAGGGTGTGAACATTATTTTCATTGTGATTGTGTTGATACGTGGTTAACTCATCAATCTAGTTGTCCACTTTGTAGAGGTTCTCTCAAAGTTGAATCTTCTTTTCCTAAGATTTTGATTCAAGAACCACCCATTAGAATTGATATCCAATTCTAG 522 0.4464 MSSPNSRSLNWHYTELDDRDLEIRGRTLFFVIVLFSIFLLVIVLFFYTRWVCRYHTHITTTYSASIHAPPPAQPQGLNPAAIKKLPIILHQAPTDPESGAWEETECCICLGEFKDGEKLKVLPGCEHYFHCDCVDTWLTHQSSCPLCRGSLKVESSFPKILIQEPPIRIDIQF* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2692 173 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 2 163 IPR044675 -
Mal2g2692 173 PANTHER RING-H2 FINGER PROTEIN ATL66 2 163 - -
Mal2g2692 173 SMART ring_2 106 147 IPR001841 -
Mal2g2692 173 Pfam Ring finger domain 105 148 IPR001841 -
Mal2g2692 173 ProSiteProfiles Zinc finger RING-type profile. 106 148 IPR001841 -
Mal2g2692 173 CDD RING-H2_PA-TM-RING 105 148 - -
Mal2g2692 173 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 66 153 IPR013083 -
Mal2g2692 173 SUPERFAMILY RING/U-box 100 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2692 Mal-Chr2 34830056 34830577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2692 2 156 C3H Transcription Factor Family AT3G11110 42.331 9.48e-36 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2692 - - gmx:100794927 280.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g2692 2 34830056 34830577 Mal8g1092 8 16754882 16755379 PCT