Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2688 ATGAAAGGCATGAAGAGTTATGAGCCACGTTCAAGCTCATCTTGTGCAGCTTGCAAATTATTGAAAAGAAGATGCACACCAAATTGCCTATTTGCACCTTACTTCCATTCTAATGAGTGCAAGAAATTCGCCAAAGTCCACAAAGTATTTGGAGCAAGCAATGTTAGCAAGATACTCATTGAAGTGCCAGAAAAACAGAGAGAAGACACAGTGAATTCTTTGGCTTATGAAGCAGAGGCAAGGCTTAGAGACCCAGTTTATGGATGCATTGGTTCCATTGCTCTGTTGCAAAGAAAGATGATGGAACTTCAACATGATTTGGCCATTGCTAAGGATCGTCTTGCTCGTTGTCGCGCAGTTGCTGCAGCTGCTACAATCACCACAACAACTCCTTCTGTAATTGATAGTTTGCATTCTGATGTTACTTTGCCTCCATTTCCTGAGTTTTCCACTTCTAATGATCTCAATGATATCTTCTGTCATGGCTCTTCTTCGCAATTTTCAGGTCGAAATGAAACAGTGGATGATTTTAATCAAATTCCATATATATTTTGA 555 0.3982 MKGMKSYEPRSSSSCAACKLLKRRCTPNCLFAPYFHSNECKKFAKVHKVFGASNVSKILIEVPEKQREDTVNSLAYEAEARLRDPVYGCIGSIALLQRKMMELQHDLAIAKDRLARCRAVAAAATITTTTPSVIDSLHSDVTLPPFPEFSTSNDLNDIFCHGSSSQFSGRNETVDDFNQIPYIF* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2688 184 Coils Coil 93 113 - -
Mal2g2688 184 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 179 - -
Mal2g2688 184 ProSiteProfiles LOB domain profile. 13 114 IPR004883 -
Mal2g2688 184 PANTHER LOB DOMAIN-CONTAINING PROTEIN 21 4 179 - -
Mal2g2688 184 Pfam Lateral organ boundaries (LOB) domain 14 111 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2688 Mal-Chr2 34748446 34749000 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2688 4 114 AS2 family AT3G11090 77.477 4.32e-62 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mal2g2688 LOB 9.1e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2688 - - cam:101504923 293.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g2688 2 34748446 34749000 Mal2g2688 2 34748446 34749000 ECH