Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2680 ATGGCTCCGAATTTGGAATGTCGCATGTACGAAGCAAGGTATCCAGAAGTGGACATGGCGGTGATGATTCAGGTGAAAAACATCGCAGACATGGGTGCTTATGTTTCACTTCTCGAATACAACAACATCGAAGGCATGATTCTGTTCTCTGAGCTTTCTCGTCGTCGAATTCGTAGTGTGAGTAGTCTAATCAAGGTGGGTCGAATTGAACCGGTGATGGTTCTTCGTGTTGATAAGGAAAAAGGTTACATTGATCTCAGCAAGCGTAGGGTTTCTGAAGAAGATATTCAAGCTTGTGAAGAAAGGTATAATAAGAGTAAGCTTGTGCATTCTATTATGCGCCATGTTGCTGAAACATTGGACCTCGATTTAGAGGATCTTTATGTTCACATTGGATGGCCTTTGTATCGCAAATATGGCCATGCTTTTGAGGCGTTCAAAAGAGTTTTGGCTGATCCTGATGCGGTTTTGAGCACTCTCACGCGAGAAATCAAGGAAGTTGGTGCTGATGGGCAAGAAGTGACCAAGGTGGTACCTGCTGTAACTGAAGAAGTGAAGGAATCTCTACTGATGAACATTAGAAGACGAATGACTCCCCAGCCATTGAAACTCAGGGCGGATATTGAAATGAAATGTTTTCAATTTGATGGAGTTCTCCACATTAAGGAGGCAATGCGGAAGGCTGAAGCTGCTGGAACTGATGACTGCCCTGTGAAAATTAAGCTTGTTGCTCCCCCACTTTATGTGCTTACCACTGAGACCCTTGACAAGGAGCAAGGAATATCGGTTCTCGAGAAAGCCATTGCTTGTTGCACTAAATCGATAGAAAAACACAAGGGTAAAGTTAAGGTGGAGAATTTCAGAGCGGCGGATGTAGATACTCCAATCAACGATACTGATAAGGTCAGTGATGATGAAGACAGTGAAGAGGAAGAAGATATTGGAATGGGCGAGGTTGATGTGGAGAATGGTAATGCGATAATGGAGTGA 990 0.4364 MAPNLECRMYEARYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSELSRRRIRSVSSLIKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLDLDLEDLYVHIGWPLYRKYGHAFEAFKRVLADPDAVLSTLTREIKEVGADGQEVTKVVPAVTEEVKESLLMNIRRRMTPQPLKLRADIEMKCFQFDGVLHIKEAMRKAEAAGTDDCPVKIKLVAPPLYVLTTETLDKEQGISVLEKAIACCTKSIEKHKGKVKVENFRAADVDTPINDTDKVSDDEDSEEEEDIGMGEVDVENGNAIME* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2680 329 Pfam Eukaryotic translation initiation factor 2 alpha subunit 127 257 IPR011488 GO:0003723|GO:0003743
Mal2g2680 329 SUPERFAMILY eIF-2-alpha, C-terminal domain 200 306 IPR024055 -
Mal2g2680 329 Gene3D EIF_2_alpha 202 316 IPR024055 -
Mal2g2680 329 Gene3D - 3 91 IPR012340 -
Mal2g2680 329 PANTHER BNAC04G04870D PROTEIN 2 329 - -
Mal2g2680 329 SUPERFAMILY Nucleic acid-binding proteins 8 89 IPR012340 -
Mal2g2680 329 CDD S1_IF2_alpha 15 90 IPR044126 GO:0003723
Mal2g2680 329 MobiDBLite consensus disorder prediction 295 329 - -
Mal2g2680 329 MobiDBLite consensus disorder prediction 302 318 - -
Mal2g2680 329 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1 2 329 IPR011488 GO:0003723|GO:0003743
Mal2g2680 329 Gene3D Translation initiation factor 2; subunit 1; domain 2 92 196 IPR024054 -
Mal2g2680 329 SMART S1_6 16 89 IPR022967 -
Mal2g2680 329 Pfam S1 RNA binding domain 15 89 IPR003029 GO:0003676
Mal2g2680 329 ProSiteProfiles S1 domain profile. 18 89 IPR003029 GO:0003676
Mal2g2680 329 SUPERFAMILY eIF2alpha middle domain-like 91 196 IPR024054 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2680 2 329 Eukaryotic Initiation Factors Gene Family AT5G05470 72.647 4.35e-164 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2680 K03237 - gmx:100805950 525.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g2680 2 34509274 34528512 Mal2g2680 2 34509274 34528512 ECH