Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2676 ATGGATTCCGACTTCCCCAACAAAGCATTAACCACCACTTGTTTCTCCGACCTAAAGCCATCACTCTCCGATCCTGTTCTTCAAACTCTCACAGACTCAAACTTCGATTTCTGCACCCCTGTTCAAGCTGCCACTATTCCCTTACTCTGCAGCTACAAAGACGTCGCCGTCGACGCCGCCACCGGTTCCGGTAAAACCCTAGCTTTCGTCATTCCACTTGTCGAAATTCTTCGGCGCTCCGCTTCTAATCCCAAACCTCACCAGGTGCTTGGAGTAATTATATCTCCTACTAGGGAATTAGCGTCACAAATATATCATGTTTCACAGCCTTTTATTTCGACTTTAGTGAATGTTAAGTCGATGCTACTTGTTGGTGGAGTTGAAGTGAAAACTGACATGAAGAAAATTGAGGAAGAAGGAGCAAATGTATTGATTGGCACGCCGGGGCGATTGCATGATATAATGAATCGGATGGATATATTGGATTTCAAAAGCTTTGAGATATTGATTTTGGATGAGGCTGATAGACTATTAGATATGGGATTCCAGAAGCAGATAAATGCTATCATAACTGAGTTGCCTAAGCTTCGAAGAACAGGCTTATTCTCTGCTACTCAAACTCAGGCTGTGGAAGAGCTTGCCAAAGCAGGATTGAGGAACCCTGTGAGGGTTGAAGTTCGAGCGGAAACAAAAACAGTGAATGATTCTGGTGCATCAAAACGAATAGAGTCTTCAAAGACACCTTCAGGTCTTCACATTGAGTACTTGGAATGTGAGGCAGATAAGAAACCGTCACAGCTGGTAGATTTCCTTGTTAAGAACCGCTCAAAAAAAATTATAATATATTTCATGACTTGTGCTTGTGTTGACTATTGGGGAGTGGTTCTTCCTCGCCTTTCTGTTTTGAAAGGCTTCTCTTTGATCTCCCTTCATGGAAAGATGAAGCAGATTGTCAGGGAGAAGGCACTAACTTCCTTTACATCCCTTTCGAATGGAATTCTTTTGTGTACGGATGTTGCAGCACGTGGACTTGACATACCTGGTGTAGACTGTATAGTACAGTATGATCCTCCTCAAGACCCAAATGTGTTCGTACATAGGGTTGGTCGAACTGCTCGGCTGGGTAAACAAGGGCATGCTGTTGTCTTCTTATTACCAAAGGAGGAATCATATGTAGAATTCTTGCGTATAAGAAGAGTTCCTCTTCAAGAGAGAACATGCTCCGACAATGCACCTGATGTTATACCCGAGATTCGTTCTGCGGCAACAAAAGATCGTGATGTCATGGAGAAGGGAGTCAGGGCATTTGTTTCTTACATTCGTGCTTATAAAGAGCATCACTGCTCTTATATTTTCAGGTGGAAAGAACTTGAAATTGGCAAATTAGCCACGGGACATGGCTTATTGCAACTTCCTTTAGTGCCGGAGATAAAACGCCACTCACTATCCACCGAGGGATTTGAACCAGTTAAAGATATCAATTTCGAGGACATTAAGTTCAGGGATAAATCAAGGGAGAAACAAAGGAAGAAAAACCTGCTAGTAAAGAAAGAAGCCAAAGAGAAAGAGCCAAAACCTAAAAAACCAAAGAAAACTCCAGATGTACCTACTGCCATGAGAAAGAAAACAGCCAAACAGAGACGTGCTAAGCAGACAGTTGAAGATGAGGAAGAGTTGACGCAAGAATACCGGTTATTGAAGAAATTGAAGAAAGGGACCATAGATGAGGAGGAATATGCCAAGTTGACAGGCACTGAGGAGTTACTTTGA 1770 0.4271 MDSDFPNKALTTTCFSDLKPSLSDPVLQTLTDSNFDFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVIPLVEILRRSASNPKPHQVLGVIISPTRELASQIYHVSQPFISTLVNVKSMLLVGGVEVKTDMKKIEEEGANVLIGTPGRLHDIMNRMDILDFKSFEILILDEADRLLDMGFQKQINAIITELPKLRRTGLFSATQTQAVEELAKAGLRNPVRVEVRAETKTVNDSGASKRIESSKTPSGLHIEYLECEADKKPSQLVDFLVKNRSKKIIIYFMTCACVDYWGVVLPRLSVLKGFSLISLHGKMKQIVREKALTSFTSLSNGILLCTDVAARGLDIPGVDCIVQYDPPQDPNVFVHRVGRTARLGKQGHAVVFLLPKEESYVEFLRIRRVPLQERTCSDNAPDVIPEIRSAATKDRDVMEKGVRAFVSYIRAYKEHHCSYIFRWKELEIGKLATGHGLLQLPLVPEIKRHSLSTEGFEPVKDINFEDIKFRDKSREKQRKKNLLVKKEAKEKEPKPKKPKKTPDVPTAMRKKTAKQRRAKQTVEDEEELTQEYRLLKKLKKGTIDEEEYAKLTGTEELL* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2676 589 SMART helicmild6 290 375 IPR001650 -
Mal2g2676 589 MobiDBLite consensus disorder prediction 513 558 - -
Mal2g2676 589 Pfam DEAD/DEAH box helicase 39 213 IPR011545 GO:0003676|GO:0005524
Mal2g2676 589 Gene3D - 3 227 IPR027417 -
Mal2g2676 589 Gene3D - 254 481 IPR027417 -
Mal2g2676 589 SMART DUF4217_3 413 476 IPR025313 -
Mal2g2676 589 MobiDBLite consensus disorder prediction 513 541 - -
Mal2g2676 589 CDD SF2_C_DEAD 254 384 - -
Mal2g2676 589 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 266 419 IPR001650 -
Mal2g2676 589 Pfam Helicase conserved C-terminal domain 263 375 IPR001650 -
Mal2g2676 589 PANTHER ATP-DEPENDENT RNA HELICASE DDX55 25 587 - -
Mal2g2676 589 Pfam Domain of unknown function (DUF4217) 417 472 IPR025313 -
Mal2g2676 589 CDD DEADc_DDX55 26 224 - -
Mal2g2676 589 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 46 224 IPR014001 -
Mal2g2676 589 SMART ultradead3 34 234 IPR014001 -
Mal2g2676 589 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 170 178 IPR000629 -
Mal2g2676 589 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 91 394 IPR027417 -
Mal2g2676 589 PANTHER RNA HELICASE 25 587 - -
Mal2g2676 589 Coils Coil 503 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2676 Mal-Chr2 34436998 34441910 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2676 13 384 Eukaryotic Initiation Factors Gene Family AT3G19760 28.686 7.59e-42 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2676 K14809 - gmx:100801482 967.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g2676 2 34436998 34441910 Mal2g2676 2 34436998 34441910 ECH