Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2672 ATGAATCTGCACTCACCCCGTAATATCAGTAATTCAAGAAGCATCTTAATTTCCAATTTTTGCTTTAAAAAAATATCCAATCGTCATATGCCAAAATGGAACAAAGAGGAGAAACAATGCACCGGAGAACATAATAATGAACAAAAGTCAGATGCAAAAGTTGATGAAGATGATAATGATATGTCTCAACTCATGGTAATGATCCTTATGAACCAATATTTAAAGAGAATAACTAAGATCGCAATAAAGGCGGAATTTCCAACAACTCCAGAACTCAAAGAAAAGATGCATGAACACCAGAAAAAAGCTTTTGAGTTTATTTGGCAAAGCATTGGTGGCTCTGGAAGAAGTGGTTGTGTAATATCTCAAGCTCCGAGAGGAAAAATAGAGAAGAAAGTGCAGCATTTGCTCAAAGTGCGGGCGAGGAAATTCTTCTTGGACAACATTGCAAAGAAAATTAACTCAGATATTGATGAGGAAAAAATGAAAGGTGGAAATTCTTTTGATACTCTTCCAGGTTTACAAATCTATACACTGCACATGAATACATCTGATGAACAACACGAGATTTTACAGAAACTTCAGAAGAAAATGGCTAAGTGTACTGGTTATCCTCTTGAGGAAGAATTGAAGAAACTAGAATCAAGCAAATTCGATTTGAGAAAAGGTTCCAAAGTAAGGTTTGTTTTGAGCCTAATCTCAAGTGTAGTGAAAAATGAAAAGGTTCTTATCTTTTGTCATAACCTTGCACCTGTGAGATTCTTGATAGAGCTATTTAAGAAATATTTTCAGTGGAAAAATGGTAAAGAGATTATGGTACTAACTGGTGAGCTAGACTTGTTTGAAAGAGGGAAAGTGATAGATAAATTTGAAGATCCTTGTGGCGGTTCCAAGATACTTCTTGCTTCAATTAATGCTTGTCCTGAAGGTATAAGTTTAACAACAGCTTTTAGAGTGATTTTTTTGGATACTGAGTGGAACCCTACAAAAACAAAGCAAGCTATTGCACGCGCTTTCCGACCAGGTCAGCAGAAAATGGTTTATGTGAATCAGTTATTGACGACCGGGTCGATGGAGGAAGATAAGTATAGAAGAACTACTTGGAAAGAATGGGTTTCTTGCATGATTTTTAGTGAGGAGTTTGTAGAAGATCCTTCTAAATGGCAAGCTGAGAAGATTGAAGATGATATACTTAGGGAGATGGTTGAAGAGGACAAGTCTAAAGCTATTCATATGATTGTGAAGAAAGAAAAGGCATCTGTAAAGGAATATGCCATTTTAAAGAGAAGCACAACAAGGCTTTCTAGAGGGAGTTGGACATCAAGGCATACTAGAAGGATCAGAACAGGAGCTACATAA 1359 0.3635 MNLHSPRNISNSRSILISNFCFKKISNRHMPKWNKEEKQCTGEHNNEQKSDAKVDEDDNDMSQLMVMILMNQYLKRITKIAIKAEFPTTPELKEKMHEHQKKAFEFIWQSIGGSGRSGCVISQAPRGKIEKKVQHLLKVRARKFFLDNIAKKINSDIDEEKMKGGNSFDTLPGLQIYTLHMNTSDEQHEILQKLQKKMAKCTGYPLEEELKKLESSKFDLRKGSKVRFVLSLISSVVKNEKVLIFCHNLAPVRFLIELFKKYFQWKNGKEIMVLTGELDLFERGKVIDKFEDPCGGSKILLASINACPEGISLTTAFRVIFLDTEWNPTKTKQAIARAFRPGQQKMVYVNQLLTTGSMEEDKYRRTTWKEWVSCMIFSEEFVEDPSKWQAEKIEDDILREMVEEDKSKAIHMIVKKEKASVKEYAILKRSTTRLSRGSWTSRHTRRIRTGAT* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2672 452 SMART helicmild6 257 342 IPR001650 -
Mal2g2672 452 Gene3D - 128 434 IPR027417 -
Mal2g2672 452 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 169 408 IPR027417 -
Mal2g2672 452 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 23 125 IPR044567 GO:0080188
Mal2g2672 452 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 205 389 IPR001650 -
Mal2g2672 452 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2 23 125 - -
Mal2g2672 452 CDD SF2_C_SNF 224 353 - -
Mal2g2672 452 Pfam Helicase conserved C-terminal domain 225 341 IPR001650 -
Mal2g2672 452 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2 129 419 - -
Mal2g2672 452 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 129 419 IPR044567 GO:0080188
Mal2g2672 452 MobiDBLite consensus disorder prediction 36 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2672 Mal-Chr2 34384624 34390850 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2672 268 360 RAD5 or RAD16-like Gene Family AT5G05130 38.298 1.14e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2672 K10875 - gmx:100811703 409.453