Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2667 ATGGCGCCCATAAAAAGGCATTTGCATCAATGGAAGCATCCATTCGATGCTAATTATCCATTTGAAGCAGTATTGAATGGATCATGGCAACTTGTGGAACTCATAAAAATTGAGTCAGGAAAAACTACCTTACACTTCATTGATACTAAACAAATTCACAGCACTTTGTCATCAGATATTCGGATAAGATCGAGAAAGGCTACTTCATCTGATTGCTCCAGCTTTTTACGACCTGGAATTGACATATCTATATTATTAGGCTTTCGACACGATGATAATTCAGACCAATTTCGGTCTATTCCAATGTGGATTGATGCAAGAATAAATTCCATACATCGACAGCCTCACGAATCTGATCAATGTTCATGTCAATATTATGTGAACTTTTATGATGATCAAGGTTCACTTGGTACAGAGATAAAAACTCTAAATAAAGAGGTTAATGCAATTGGAATAGATCAAATTTTCATCCTTCAAAGGCTTCAACATAATACTTGTGAAGGCTTGTTAAAAGAAAATGATAGCTCTGAAGTTAAGCCTTATAGGTGGGATTCATCAGAAGATTGCTCTTCGTTATCACAATCTAGATTACTCTTAGGAAAAATTTTATCTGATCTTTCGTGGTTTGTTATTACATCTTTTCTAAAGAAGGTTTCATTCGATATAAGATCTGTGCAAAATAAGATTGTGTATCAAGTTATGGGAAATGATACTGATGTTATTAGTCCTTGGCTTATAAATGTTGTGAACTTCAAATCAAAAAATGGATCACTAGTACCTATTGTTTCTCAATTTGATGTTTTTCGTGATTATGATGGAGAAGAAGATGAAGTTCCACCAATGCCATCAAATGAAGTTGAAGGCTTGCGACGTTCAAAACGTAGAAATGTACAGCCTGAACGTTACGTAGGTTGTGTTGTTGAGAAGTTGGAAGTTGGTAATTTTCGAACATGGCCGTTGAAGAGAGCAACTTATGTGATAGAAGATGAAAGCTCTTCTTCAGATTCAGAAGAGGATGATGGTAAGAGTGAGGAAAAACATCAAATCTTTAATAATATTTCTAGTGCAAAGAAGAATGGTGCTGATGTGTTGAAGTTAGAGCCCTGCATTGAGAATACTACAATATCATGTGATGAAGAAGTTTATGGTAATGTCCCTTTGAGACATTATAATAGTTTCTGCAAAGAGAATATTAAGAGGAAGAGATTTCATGATGTGGATGATATGGATTTTGAAACCAAATGGGAAGGGATTCATTTCAAAAAAGGAGCTCAAACAAAAAATAATCATTCGATTTATTCGGCTAACAGAAGTCTTGTTCAGGAAGAACAAGATCATAAAGGCGGTGGAACGTTCAATGCTGATGCCCGCAAGGAAATAATAGATACTTACATGAAGAATTTTGATAGTCTACCAACTGAAGAAGAGCCAATTGTAAATGAGAAGTGGAAGGAAACAAGCAAGTTGGAGCAAAAGGAGGAAGAAAAAGTATCAAAAAGCGATGATGAGGAAGAAAATCCTGATGATTTGGATGCCTTGTGGGAAGAAATGGATACAGCTTTGAGATCAAGTTATCTTCTTGATGGAACTGAGGGCTCAAATGCTGAGGTTGTAGCTGATACCAAGAAAGAATCCAAGGAAATTTGTGAACATGATTATAGATTGGATGAAGAAATTGGAATATACTGCCTTCGATGCGGATTTGTGAAAACCGCAATACGAGATATTTCTGAACCCGTTGTGGAACGCTCAAAAAGGCACAAAAAGGAGAACCAATGCAGTGAAGAAAATAAGGAATGTAAATCAGAGCCAAAAGTTGATGAAGTTGATGATAATGATATGTTCTCAACTCATGCTACTGATCCTGATGAACCAGTGACTAATGAAAATGACAATGTTTGGGAATTGATTCCTGAACTTAAAGAAAAGATGCATGAACACCAGAAAAAAGCTTTTGAATTTCTTTGGCAAAACATTGCTGGCTCTATGGAACCATCACTCATGAAAGAAAAATCTAAAACAAGTGGTGGCTGTGTCATATCACATGCTCCTGGAGCAGGAAAAACCTTTCTCATCATTTCTTTTCTTGTAAGTTACTTGAAGTTATTTCCAGGGAAAAGACCTCTAGTCCTAGCTCCAAAAACCACACTCTACACGTGGCGAAAAGAGTTTAAAAAATGGAAGACTCCTGTGCCGGTTTATCTTATCCATGGCCGTCGAACCTGGAGAGGTTCGACGACAGCAAAATCAATGATTCTTCCTGGATTTCCAAGACCTTCTAGTGATGTCAAACATGTTTTGGATTGTCTTAGCAAGATACAGAAGTGGCTTTCACACCCTAGTGTTCTTGTCATGAGCTATTCTTCATTTTTACAATTAATGAGATCAAAAGATACAAAATTTGCACACAGAAAATACATGGCTAAAGCATTGAGAGAAAACCCTGGAATCTTGATACTTGATGAAGGACACAATCCTAGAAGCACTAAATCAAGGTTGAGGAAATGTTTAATGAAACTTCCAACAGAATTGAGAATATTACTCTCTGGCACATTGTTTCAGAACAATTTCGGTGAATATTTCAACACACTTTGTTTAGCTAGACCGAAATTCGTTCATGAAGTTCTACTAGAGTTGGATTCTAAATACCGAAGGAAAGGAAAAATCATGGAGAAAGCGCGGCATTTGCTTGAGGCGCGCGCGAGAAAATTCTTCTTAAACAACATTGAAAAGAAAATTAACTCAGATATTGATGAGGAGAAGATGCAGGGTCTATATGTGCTGCGAAAAATCACGTCCGATTTTATTGATGTGTACGGCAGTGGAAATTCTTCTGAGACTCTTCCTGGTTTACAAATCTATACATTGCTCATGAATACGTCCGATGAACAACATGAGATTGTACAGAAACTTCAGAAGAAAATGGCTGAGAGCATCGGTTACCCTCTTGAGGTTGAGCTTTTGATAACACTCGGATCAATACATCCATGGTTGATCAAAACAGCTGCATCATGTGTAACTAAGTTTTTTGCGGAGGAAGAATTGAAGAAACTAGAATCAAGCAAATTCGATTTGAGAAAAGGTTCTAAAGTAAGATTTGTTTTGAGCCTAATCTCACGTGTAGTGAAAAATGAAAAGGTTCTTATCTTTTGTCATAACCTTGCACCTGTGAGATTCTTAATAGAGCTCTTTGAGAAATATTTTCAGTGGAAAAATGGTAAAGAGATTATGGTACTAACTGGTGAGCTAGACTTGTTTGAAAGAGGAAAAGTGATAGAGAAATTTGAAGATCCTTGCGGCGGTTCCAAGATACTTCTTGCTTCAATTAATGCTTGTGCTGAAGGTATAAGTTTAACAGCAGCTTCTAGAGTGATTTTTCTGGATTCTGAGTGGAATCCTTCAAAAACAAAGCAAGCTATAGCACGCGCTTTTCGACCAGGCCAGCAGAAAATGGTTTATGTGTATCAGTTATTGACGACCGGGTCGATGGAGGAAGATAAGTATAGAAGAACTACTTGGAAAGAATGGGTTTCTTGCATGATTTTTAGTGAGGAGTTTGTGGAAGATCCTTCTAAATGGCAAGCCGAGAAGATTGAAGATAATATACTTAGGGAGATGGTTGAAGAGGATAAGTCTAAAGCTATTCGCATGATTATGAAGAATGAAAAGGCTTCAACAAGCTAA 3684 0.3689 MAPIKRHLHQWKHPFDANYPFEAVLNGSWQLVELIKIESGKTTLHFIDTKQIHSTLSSDIRIRSRKATSSDCSSFLRPGIDISILLGFRHDDNSDQFRSIPMWIDARINSIHRQPHESDQCSCQYYVNFYDDQGSLGTEIKTLNKEVNAIGIDQIFILQRLQHNTCEGLLKENDSSEVKPYRWDSSEDCSSLSQSRLLLGKILSDLSWFVITSFLKKVSFDIRSVQNKIVYQVMGNDTDVISPWLINVVNFKSKNGSLVPIVSQFDVFRDYDGEEDEVPPMPSNEVEGLRRSKRRNVQPERYVGCVVEKLEVGNFRTWPLKRATYVIEDESSSSDSEEDDGKSEEKHQIFNNISSAKKNGADVLKLEPCIENTTISCDEEVYGNVPLRHYNSFCKENIKRKRFHDVDDMDFETKWEGIHFKKGAQTKNNHSIYSANRSLVQEEQDHKGGGTFNADARKEIIDTYMKNFDSLPTEEEPIVNEKWKETSKLEQKEEEKVSKSDDEEENPDDLDALWEEMDTALRSSYLLDGTEGSNAEVVADTKKESKEICEHDYRLDEEIGIYCLRCGFVKTAIRDISEPVVERSKRHKKENQCSEENKECKSEPKVDEVDDNDMFSTHATDPDEPVTNENDNVWELIPELKEKMHEHQKKAFEFLWQNIAGSMEPSLMKEKSKTSGGCVISHAPGAGKTFLIISFLVSYLKLFPGKRPLVLAPKTTLYTWRKEFKKWKTPVPVYLIHGRRTWRGSTTAKSMILPGFPRPSSDVKHVLDCLSKIQKWLSHPSVLVMSYSSFLQLMRSKDTKFAHRKYMAKALRENPGILILDEGHNPRSTKSRLRKCLMKLPTELRILLSGTLFQNNFGEYFNTLCLARPKFVHEVLLELDSKYRRKGKIMEKARHLLEARARKFFLNNIEKKINSDIDEEKMQGLYVLRKITSDFIDVYGSGNSSETLPGLQIYTLLMNTSDEQHEIVQKLQKKMAESIGYPLEVELLITLGSIHPWLIKTAASCVTKFFAEEELKKLESSKFDLRKGSKVRFVLSLISRVVKNEKVLIFCHNLAPVRFLIELFEKYFQWKNGKEIMVLTGELDLFERGKVIEKFEDPCGGSKILLASINACAEGISLTAASRVIFLDSEWNPSKTKQAIARAFRPGQQKMVYVYQLLTTGSMEEDKYRRTTWKEWVSCMIFSEEFVEDPSKWQAEKIEDNILREMVEEDKSKAIRMIMKNEKASTS* 1228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2667 1227 MobiDBLite consensus disorder prediction 477 507 - -
Mal2g2667 1227 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 669 870 IPR014001 -
Mal2g2667 1227 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 948 1211 IPR027417 -
Mal2g2667 1227 Gene3D - 613 911 IPR038718 -
Mal2g2667 1227 SMART helicmild6 1062 1147 IPR001650 -
Mal2g2667 1227 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2 21 1226 - -
Mal2g2667 1227 MobiDBLite consensus disorder prediction 582 629 - -
Mal2g2667 1227 Gene3D - 949 1227 IPR027417 -
Mal2g2667 1227 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1033 1194 IPR001650 -
Mal2g2667 1227 Pfam Helicase conserved C-terminal domain 1030 1146 IPR001650 -
Mal2g2667 1227 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 631 872 IPR027417 -
Mal2g2667 1227 Pfam SNF2-related domain 653 921 IPR000330 GO:0005524|GO:0140658
Mal2g2667 1227 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 21 1226 IPR044567 GO:0080188
Mal2g2667 1227 SMART ultradead3 640 878 IPR014001 -
Mal2g2667 1227 CDD SF2_C_SNF 1029 1158 - -
Mal2g2667 1227 MobiDBLite consensus disorder prediction 582 618 - -
Mal2g2667 1227 MobiDBLite consensus disorder prediction 477 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2667 Mal-Chr2 34313713 34319157 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2667 1044 1165 RAD5 or RAD16-like Gene Family AT5G05130 35.772 2.34e-12 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Mal2g2667 SNF2_N 6.5e-18 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2667 K10875 - jre:108991882 1318.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g2667 2 34313713 34319157 Mal2g2667 2 34313713 34319157 ECH
Mal2g2667 2 34313713 34319157 Mal8g1069 8 16444637 16449727 PCT