Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2615 ATGGTTAAGTCAGAGAATAACAAGATCAAAAAAGAAGCATCAAATTCAATCTCAGATAGTAGCAAGAAGAAATACAAAGGAGTAAGAATGAGGAGTTGGGGTTCATGGGTTTCAGAGATTAGAGCACCAAATCAAAAAACAAGAATATGGTTAGGTTCTTATTCAACTCCTGAAGCAGCTGCTAGAGCTTATGATGCTGCACTTTTATGCCTTAAAGGTTCATCATCAGCATCAAATCTCAATTTCCCTTTAACAACCTCTTCTTCACATTACAATATTCCTCAAGATATCATGTCTCCAAAATCAATTCAAAGAGTTGCTGCAGCTGCTGCAAATAGTTTCATTGATAATAATAATAATGTTAATGTCAATGTCAACAATGTTAACACTCCCTCTTCATCATCATCATTGGTATCATCTCCATCATCAATGGTTTCTTCTGATGATGTTTCTTCACTTATGTCATCTTTTGATCAAGCTAATAATGAATCAATGACTATGATGGAAACTTGGTATGGATTAGAAGGTTTACAATCTCCTAAATATGTTGATCAAATGTTGTTAAGTGCTTCTTTCTTTGATATTGATTCATCATCACATTTGCTTGGTGATGATCTTTATGAAGAAAGTGACATTCGTTTGTGGAACTTCAGCTGA 657 0.3409 MVKSENNKIKKEASNSISDSSKKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTPEAAARAYDAALLCLKGSSSASNLNFPLTTSSSHYNIPQDIMSPKSIQRVAAAAANSFIDNNNNVNVNVNNVNTPSSSSSLVSSPSSMVSSDDVSSLMSSFDQANNESMTMMETWYGLEGLQSPKYVDQMLLSASFFDIDSSSHLLGDDLYEESDIRLWNFS* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2615 218 Gene3D AP2/ERF domain 23 85 IPR036955 GO:0003700|GO:0006355
Mal2g2615 218 CDD AP2 23 83 IPR001471 GO:0003700|GO:0006355
Mal2g2615 218 SUPERFAMILY DNA-binding domain 24 83 IPR016177 GO:0003677
Mal2g2615 218 MobiDBLite consensus disorder prediction 1 21 - -
Mal2g2615 218 Pfam AP2 domain 24 73 IPR001471 GO:0003700|GO:0006355
Mal2g2615 218 SMART rav1_2 24 89 IPR001471 GO:0003700|GO:0006355
Mal2g2615 218 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 8 218 - -
Mal2g2615 218 ProSiteProfiles AP2/ERF domain profile. 24 83 IPR001471 GO:0003700|GO:0006355
Mal2g2615 218 PRINTS Ethylene responsive element binding protein signature 25 36 IPR001471 GO:0003700|GO:0006355
Mal2g2615 218 PRINTS Ethylene responsive element binding protein signature 47 63 IPR001471 GO:0003700|GO:0006355
Mal2g2615 218 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF014 8 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2615 Mal-Chr2 33449044 33449700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2615 25 217 AP2-EREBP Transcription Factor Family AT1G21910 48.309 1.72e-45 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal2g2615 AP2 2.8e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2615 - - cam:101495993 268.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g2615 2 33449044 33449700 Mal2g2615 2 33449044 33449700 ECH