Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2613 ATGTCTTTGAGTCCTCCAAGAGAGAGAATCAGCCAACGTAGGAACTTCCAACTCTACTATTGCTTCCAATGCAACCGCACGGTCCGTGTTGCACCATACAACTCCTCTGACTTAATATGCCCCCGCTGCTTCGGTCAATTCATATGTGAAATCAACATTCCAAGACCAAGACTCGTAGTAGACTTCACCGCACATGATCCTTCCCCAGAAGCGCGTTTACTAGAAGCACTTTCCATCATGCTCGACCCACCCATCCGTCGTTTTAACCCCGAAACCCAAACCCGACGCCCACGTCGCGCCACACAAGAAGTTCCCGTGCACCGCCACACAGGAGATCATCACCCAACCGAAACACAACCCGAACCTGAACCCGGGATCCAACACCGTCCACGCACATGGGTAATTCTTCAACCCGTGGATCCTTCTTCCAATTCCAATTCAAACACTTTCCAACCTGTAATTTATCCACGTGGACGACAAGGACCAATTCCACGTGGCGTTGATTCAAGAGACTATTTTTTCGGGCCGGGTTTTAACGAACTAATAGACCAAATAACGGAAAATGACCGGCAGGGTCCACCACCAGTGCCGGAAAGCGGTATAAACGCGATTCCGACGGTGAAAATCGAAAGCAAAAATCTGAAAGAGAATTCTCATTGTCCTGTTTGTCAAGAAGAGTTTGAAATTGGTGGTGAAGCTAGGGAACTTCCATGTAAACATATATATCACTCTGATTGCATTGTTCCTTGGCTTAGACTTCACAATTCTTGTCCAATTTGTCGCCAAGAGATTCCTTTCTCTTCTGATGATGATGAAGATGAGTGTGGTGAAGATGGTGGAGGTAGGTTACGTAGGTGCATTAGGTGGACGAGAATTTCGTCTCTTTGGCCTTTTCATGGAAGGTATCGGAGAGTTCATCCTCAAAGAGATAATGGTTCTGGTTCTTCTTCAAGAATAAGGGGTGATTGA 969 0.4665 MSLSPPRERISQRRNFQLYYCFQCNRTVRVAPYNSSDLICPRCFGQFICEINIPRPRLVVDFTAHDPSPEARLLEALSIMLDPPIRRFNPETQTRRPRRATQEVPVHRHTGDHHPTETQPEPEPGIQHRPRTWVILQPVDPSSNSNSNTFQPVIYPRGRQGPIPRGVDSRDYFFGPGFNELIDQITENDRQGPPPVPESGINAIPTVKIESKNLKENSHCPVCQEEFEIGGEARELPCKHIYHSDCIVPWLRLHNSCPICRQEIPFSSDDDEDECGEDGGGRLRRCIRWTRISSLWPFHGRYRRVHPQRDNGSGSSSRIRGD* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2613 322 MobiDBLite consensus disorder prediction 139 162 - -
Mal2g2613 322 Pfam Ring finger domain 219 261 IPR001841 -
Mal2g2613 322 ProSiteProfiles Zinc finger RING-type profile. 220 261 IPR001841 -
Mal2g2613 322 CDD RING-H2_RNF126_like 220 261 - -
Mal2g2613 322 MobiDBLite consensus disorder prediction 89 119 - -
Mal2g2613 322 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 8 278 - -
Mal2g2613 322 PANTHER - 8 278 - -
Mal2g2613 322 SMART ring_2 220 260 IPR001841 -
Mal2g2613 322 Pfam zinc-ribbon 17 51 IPR039525 GO:0061630
Mal2g2613 322 SUPERFAMILY RING/U-box 201 267 - -
Mal2g2613 322 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 183 267 IPR013083 -
Mal2g2613 322 MobiDBLite consensus disorder prediction 86 127 - -
Mal2g2613 322 MobiDBLite consensus disorder prediction 139 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2613 Mal-Chr2 33436582 33437550 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2613 192 310 C3H Transcription Factor Family AT1G68180 44.000 1.03e-27 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2613 K11982 - gmx:100787399 383.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g2613 2 33436582 33437550 Mal2g2613 2 33436582 33437550 ECH