Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2592 ATGGACGAATTGCAACGAGCACTGAAGAATTGTAATTTAACAGTTTCTACTATCTCAGAAAAGGGTCGTTCTCTCTTTACTACTAGGGATTTCTACCCAGGGGAGGTGATTATTAGCCAAGAGCCTTATGTTTGTGTTCCAACTGAAAAAAGGTGTGATGGATGTTTCACAACAACTAACCTTAGCAAGTGTTCACGTTGTCAAGTTGTTTGGTATTGTGGAACACCGTGTCAGAAGTCGGAGTGGAAATTGCATCGTCTTGAATGTGAGGCACTCTCGAGGCTAGACAACCACAAGAGAAAATCTGTGACACCGTCGATACGGTTGATGCTCAAACTTTATCTTAGAAGGAAGTTGCAAGATGAGAAGATCATTCCAAGCACTGCTATGGACAACTACAAGTTAGTGGAGGCATTAGTGGCTCACATGTCTGACATCACAGAGGAGCAGCTGGTGTTATACGCGCAGATGGCAAACCTTGTACACTTAATACTACGATGGCCTGAAATCAATATTAAAGAGATTGCGGAAATTTTTTCCAAGTTTGCATGTAATGCGCATACCATTTGTGACAGTGAGTTGAGACCTTTGGGAACAGGATTGTATCCTGTTGTTTCCATTATCAATCACAGCTGCTTGCCCAATTCGGTATTGGTTTTTGATGGAAAGGTAGCATCCGTACGGGCTTTGCAACATTTACCTAAAGGGACTGAGGTATTGATAAGTTATATAGAGACAGCTGGAAGCACTGTGACTCGACAAAAGGCTCTCAAAGAGCAGTACCTATTCACTTGTGTTTGTCCCCTCTGTTCTAAAGTGGGTCAGTATGAAGATGTTCGAGAAAATGCAATTCTAGAAGGATACAGATGCAAAAATGAAACATGTGATGGTTTCTTGCTCCGCACAACTGATGGAAAAGTGTTTCAATGCCAAGAATGTGGGTTAGTTAGAGACAAGGAAGAGATAAAGCAAATTGCAACTGAAATAAAACTTCTATCAGAAGAAGCTTCTAAGCCTTCTTCTAGTGGCAATGATCATGAAGCTATTTCCATACATAAAATGATTGAGAAACTGCAAACAAAACTATATCACCCTTTCTCGATCAATTTGATGCAAACACGAGAGACGATTTTGAAGTCATTAATGAAGCTGGAATATTGGAGAGAAGCTTTAGCATATTGCAAATTGACCATACCAATCTATCAAAGAGTGTATCCAGCTGTCCACCCTTTGCTTGGCTTGCAAAGTTATACTTGTGGAAAACTTGAATGGTATCTTGGAGATACAGAGGAAGCTGTTAAATCTTTGACCAAGGCTGTGGATATACTAAGGATTACTCATGGTACAAATACTCCATTTGTGAAGGAACTATTGATGATGTTGGAGGAAGCCCGTGCAGAAGCATCTTACAAATTGTCCTCCAAAGAGTAG 1431 0.4046 MDELQRALKNCNLTVSTISEKGRSLFTTRDFYPGEVIISQEPYVCVPTEKRCDGCFTTTNLSKCSRCQVVWYCGTPCQKSEWKLHRLECEALSRLDNHKRKSVTPSIRLMLKLYLRRKLQDEKIIPSTAMDNYKLVEALVAHMSDITEEQLVLYAQMANLVHLILRWPEINIKEIAEIFSKFACNAHTICDSELRPLGTGLYPVVSIINHSCLPNSVLVFDGKVASVRALQHLPKGTEVLISYIETAGSTVTRQKALKEQYLFTCVCPLCSKVGQYEDVRENAILEGYRCKNETCDGFLLRTTDGKVFQCQECGLVRDKEEIKQIATEIKLLSEEASKPSSSGNDHEAISIHKMIEKLQTKLYHPFSINLMQTRETILKSLMKLEYWREALAYCKLTIPIYQRVYPAVHPLLGLQSYTCGKLEWYLGDTEEAVKSLTKAVDILRITHGTNTPFVKELLMMLEEARAEASYKLSSKE* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2592 476 Pfam MYND finger 52 89 IPR002893 -
Mal2g2592 476 ProSiteProfiles Zinc finger MYND-type profile. 52 89 IPR002893 -
Mal2g2592 476 ProSitePatterns Zinc finger MYND-type signature. 52 89 IPR002893 -
Mal2g2592 476 Gene3D SET domain 24 270 IPR046341 -
Mal2g2592 476 SMART set_7 11 250 IPR001214 GO:0005515
Mal2g2592 476 Coils Coil 1 21 - -
Mal2g2592 476 Coils Coil 315 335 - -
Mal2g2592 476 ProSiteProfiles SET domain profile. 11 244 IPR001214 GO:0005515
Mal2g2592 476 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR1 1 468 - -
Mal2g2592 476 Pfam SET domain 22 243 IPR001214 GO:0005515
Mal2g2592 476 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 1 468 - -
Mal2g2592 476 SUPERFAMILY TPR-like 342 447 IPR011990 GO:0005515
Mal2g2592 476 SUPERFAMILY SET domain 10 243 IPR046341 -
Mal2g2592 476 Gene3D - 102 186 - -
Mal2g2592 476 Gene3D - 51 101 - -
Mal2g2592 476 Gene3D Tetratricopeptide repeat domain 397 474 IPR011990 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mal2g2592 SET 1.1e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2592 K11426 - gmx:100789518 777.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g2592 2 33099081 33104502 Mal2g2592 2 33099081 33104502 ECH