Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2580 ATGTCAATATATAGTGAAGCAACTCTGCATCTCGATAATGATAGTGAAGAGGTAGAATTCACCAATGGTAATGGATTTGGTAGTGATGGAGATACAGGGACAGAGAATTGCAATGGTCGTAAATGTTTAAGTGAAATTACAGATGATGATATAAGAGCTATGGAATTTAGCACAGAGGGAGAAGCTATAGAATTTTACACAACGTATGCACGTTTCCATGGGTTTGCCGTAAGGAAGGATGAAGTGGTAAAACATGAGGGGAAAATTGTTGCGCGGCGATTATTTTGCAATAAACAGGGCAAGAGTGAAACTAAAAATAAGAAGAATGAGGATAAACATAGGCCAACTATACGAACTGGTTGCCTTGCTAGACTTAGAGTGGCCTATGATTTCATTCGGAAGATTTGGAATCAGCTGCTGTGTTTAAATCAGCTGCTGTGTTGCTGA 447 0.3915 MSIYSEATLHLDNDSEEVEFTNGNGFGSDGDTGTENCNGRKCLSEITDDDIRAMEFSTEGEAIEFYTTYARFHGFAVRKDEVVKHEGKIVARRLFCNKQGKSETKNKKNEDKHRPTIRTGCLARLRVAYDFIRKIWNQLLCLNQLLCC* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2580 148 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 47 137 - -
Mal2g2580 148 Pfam FAR1 DNA-binding domain 64 129 IPR004330 -
Mal2g2580 148 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 47 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2580 Mal-Chr2 32933624 32934070 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal2g2580 FAR1 8e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2580 - K17604 mtr:MTR_3g080590 92.8189