Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2574 ATGAACCGTCAAGTGCTACCACCGTTACCCAAAAACGAAACCACACTCAACCCAAAACTCTGGCGAGCTATCGCCGGCGCCGCCGTGCAAATCCCCACCGTCAATTCTAGGGTTTACTACTTCCCTCAAGGTCACATGGACCAAGCTTCTTCACTTCCTAACAACCTCTCACCGCTTCTTCTTTCTCGCCCCTACATTCTCTGCTCCGTCTCCGCCGTTCACTTTCTTGCCGATCCGAAAACCGATGAGGTTTTTGCTAAGCTTTTTCTTCAACCTCTCAACGATTTCACTGTCAATTTTCCACGGACTCCGGCGATTGAAGCTGACGACGGTGAGAGAATTTCTTCGTTTGCGAAGATTCTTACTCCTTCTGATGCGAACAACGGTGGTGGATTTTCTGTTCCGAGGTTTTGTGCTGATTCGATTTTTCCTCCGTTGGATTATAGTATGGACCCGCCTTTGCAGAATCTGTTGATTACCGACGTTCATGGTTTGACTTGGGAGTTTCGTCATATTTACCGTGGAACGCCGCGCCGGCATCTGTTGACCACCGGATGGAGTAGGTTTGTGAACGGTAAGAAGCTTGTTGCTGGTGATTCGGTTGTTTTTATGAAGAATACTAGAGGTGCAATGTTCATCGGAATCCGTCGTGCTGTTCGATTCGTTCCAAATCGGAGCGGTTGTGTTGGCTCCGATGTGGCGAGGTTGTGTCTTCCGATCTGTGGTGTGAGAAATAGGGTGAATGAAGAAGAGGAGGAGAAGTTGGTGGAAAAGTGTAGAGAGGGATTTTCGAGGAACGGGAAGGGGAAGTTGTCTCCGGTGGCGGTTGCGGAGGCGGCGGAAATGGCGGCACAGGGGATGGGGTTTGAAGTGGTGTATTATCCGAGAGCAGGGTGGTCGGATTTTGTGTTGAAAGCGGAGGTGGTGGATGCGGCGATGAGTGTTACTTGGTGTCCTGGAATGAGAATCAAAATGGCTGTTGAGACTGATGATTCTTCCAGGACTACTTGGTTTCAGGGTGTAGTGTCTCAAGTCTCTGTTCCTGATCATGGTGCTTGGCGTGGTTCACCTTGGAGAATGCTTCATATTACATGGGACGAACCTGAAGTGTTGCAAACTTCCAAGTGGGTCAGCCCTTGGCAGGTCGAACTTCTTTCTACTACACCTTCCCTTCATACCCCATTTCCCCCAATGAAAAGGACTAGAGGGGGATCTGGGGTGTTAACTGATGGAGATGGAGACCCCTTTTCTATCACAGGGTTCACTAATTCAACAATTGGACAGTTGAATCAACCATTGTTGAGTTACGGTACTTTTCCTGCTGGCATGCAGGGAGCCAGGCATGATCTATTTTCCGTTTCAAGTTTTTCGAACTTTCCAGGTGATAACTTCCGTCTTTGTATGGGTAACTCCTTTGGCAGCAACACAGTGCCGGGGTTGAAATCTTTTTCAACTGATCTAAATGTTGGCAGTTCTCAATCTGATGATTTTTCACCAGAGAGCCAGAGTAGTTTGCCTTCCTTTGGCACAGATTTTGTTCGGAACTACAACTGCAACTCAATGAAACCCGGGCCTGTAACATTTCAGCTATTTGGTGCAGTCATTCAGACAGAACAGCCTGTTGAAAGTGGTTCACATGGTACTGTTAGCACAGGAGATGATAGCAGTAAGGGCTGTAACGGAACTGAAGGTATTAACAACCCTCTTGAGGATTCGACTTACTCGAAATTGCTTGACAGGCTTGATGGCCAGTGCCAAATAGCCTCAACAGTTGAGGCGTGCTATCTGTGA 1791 0.4802 MNRQVLPPLPKNETTLNPKLWRAIAGAAVQIPTVNSRVYYFPQGHMDQASSLPNNLSPLLLSRPYILCSVSAVHFLADPKTDEVFAKLFLQPLNDFTVNFPRTPAIEADDGERISSFAKILTPSDANNGGGFSVPRFCADSIFPPLDYSMDPPLQNLLITDVHGLTWEFRHIYRGTPRRHLLTTGWSRFVNGKKLVAGDSVVFMKNTRGAMFIGIRRAVRFVPNRSGCVGSDVARLCLPICGVRNRVNEEEEEKLVEKCREGFSRNGKGKLSPVAVAEAAEMAAQGMGFEVVYYPRAGWSDFVLKAEVVDAAMSVTWCPGMRIKMAVETDDSSRTTWFQGVVSQVSVPDHGAWRGSPWRMLHITWDEPEVLQTSKWVSPWQVELLSTTPSLHTPFPPMKRTRGGSGVLTDGDGDPFSITGFTNSTIGQLNQPLLSYGTFPAGMQGARHDLFSVSSFSNFPGDNFRLCMGNSFGSNTVPGLKSFSTDLNVGSSQSDDFSPESQSSLPSFGTDFVRNYNCNSMKPGPVTFQLFGAVIQTEQPVESGSHGTVSTGDDSSKGCNGTEGINNPLEDSTYSKLLDRLDGQCQIASTVEACYL* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2574 596 SUPERFAMILY DNA-binding pseudobarrel domain 114 223 IPR015300 -
Mal2g2574 596 Gene3D - 114 219 IPR015300 -
Mal2g2574 596 MobiDBLite consensus disorder prediction 541 565 - -
Mal2g2574 596 SMART B3_2 117 219 IPR003340 GO:0003677
Mal2g2574 596 Pfam B3 DNA binding domain 117 218 IPR003340 GO:0003677
Mal2g2574 596 ProSiteProfiles B3 DNA-binding domain profile. 117 219 IPR003340 GO:0003677
Mal2g2574 596 Pfam Auxin response factor 279 361 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mal2g2574 596 CDD B3_DNA 116 217 IPR003340 GO:0003677
Mal2g2574 596 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 12 595 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mal2g2574 596 PANTHER AUXIN RESPONSE FACTOR 12 595 - -
Mal2g2574 596 Gene3D - 317 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2574 Mal-Chr2 32826649 32829377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2574 12 563 B3 DNA Binding Superfamily AT1G77850 47.527 2.02e-164 480
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mal2g2574 B3 1.3e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2574 - - qsu:112025063 681.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g2574 2 32826649 32829377 Mal2g2574 2 32826649 32829377 ECH