Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2561 ATGTCATCATCATCATGGAATTCTTCTCCGTGTGCAGCGTGCAAGCTTCAGCGTCGAAAATGCACAAAGGAATGCATTTTTGCACCTTATTTTCCGCCGGAAAATCCTCAAAAATTCACCTACGTTCACAAAGTGTTTGGTGCTAGTAACGTGGCAAAGCTTCTGAATGAGTTGGATGTTTCTCAGCGTGAAGATGCTGTTAAGTCTTTAGCTTATGAAGCAGAAGCGCGTTTGAGAGATCCTGTTTATGGTTGTGTTGGTCTTATTTCACATCTTCAGAATAAGCTTAAGAATTTGCAGAATGAACTTAATGTTGCTAAGAAAGAACTTGCTTCTTATGTTGGTCCTCAGATTATGCTTCCTTCTCCGATGATGCCGATGACGGCGACGTCGTCGAGTTCTTATTTCTCTGTGGCTTCTTCTGTTCATCAACAGCGTCAAGAGATTTTTACATTCAATGGTGCTGAAAACTCGTTTTGTAACAACTTTCAAATGCAGTACCCTTTTCAGAATCAGTTAATGGTTTCATCATCATCCACACAGACACCACAACCCAACAACCCATTTTTCTCAAAGAAGGTGTTCAAGGCAGAAAGGGACAACCTTGGAGAAGGTAACATCACTATGGCAAGGAGTTGTGAAATGTTTGAATATATTTGGTTCATCTATTTTTTATGCTAG 681 0.4023 MSSSSWNSSPCAACKLQRRKCTKECIFAPYFPPENPQKFTYVHKVFGASNVAKLLNELDVSQREDAVKSLAYEAEARLRDPVYGCVGLISHLQNKLKNLQNELNVAKKELASYVGPQIMLPSPMMPMTATSSSSYFSVASSVHQQRQEIFTFNGAENSFCNNFQMQYPFQNQLMVSSSSTQTPQPNNPFFSKKVFKAERDNLGEGNITMARSCEMFEYIWFIYFLC* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2561 226 PANTHER LOB DOMAIN-CONTAINING PROTEIN 32-RELATED 7 179 - -
Mal2g2561 226 Coils Coil 89 109 - -
Mal2g2561 226 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Mal2g2561 226 Pfam Lateral organ boundaries (LOB) domain 10 107 IPR004883 -
Mal2g2561 226 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 7 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2561 Mal-Chr2 32646637 32648849 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2561 8 121 AS2 family AT5G66870 78.070 3.37e-61 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mal2g2561 LOB 1.2e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2561 - - gmx:100812543 192.586