Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2521 ATGGGAAGGTCCCCATGTTGTGATGAGAGTGGCCTAAAGAAAGGACCTTGGACTCCTGAAGAAGATCAAAAGCTAGTTGAACACATTCAGCAACATGGCCATGGAAGTTGGAGAGCACTCCCTAAGCTAGCTGGTCTTAATAGATGTGGAAAGAGTTGTAGGCTAAGGTGGACCAATTATTTAAGGCCTGATATTAAGAGAGGAAAATTCTCTCAAGAAGAGGAGCAAACAATTCTTCATCTTCATTCAATCCTTGGAAACAAATGGTCAGCAATCGCCACACATCTACCTGGAAGAACAGATAATGAGATAAAGAATTTCTGGAACACTCATTTAAAGAAAAAGTTGATTCAGATGGGTTTTGATCCAATGACTCACCAACCAAGAACTGATCTTGTTTCCACCATACCATATCTACTAGCTTTAGCAAACATGACAGAACTTATGGATCATCATCATCATCAGTCATCATGGGATGATCAACAACAATCTGCAATGAGTACTTTACAAGCAGAAGCAGTTTATCTTGCAAAGCTTCAATGCCTTCAATATTTACTACAATCTTCAAATTCCTCCTTGAATGTTAATAATACCAATATTAATTCCTATGACCAAAATGCAATCATCGCAAACATGGAACAACAACCTTTGAGTTTGTTAAACACAATCTCTAATGTGAAACAGAACACAATAATGGACTGTTCACAACTGGATAGTGCTCATGCAGCCTCATTTTCTCAACCACTCCACAACCAAAGTGTGCTACCCCACTTTTTAGACCCACAACAAGTCTCTTTCAGTTCACAATCATGTTTGAATAATGAGCAAAGTCAAGGTGGTACTATTACCAACTTTGCAACAGTTGATGAAACATCATCATGGATTAATGTTCCATGTTCTGCTCCAATATCTATTCCTCCAAATGCTGCTATAGGAATCACTTCTGCAGGAGATGCTAGCAGCAGCACTTCTAGCTATGGAGGAGGAGTAGTAGGACCCACTGCAGCACCTTATTGGTCTGAACTTTTTTTTGAGGACCCCATTATGCATGAATTATCTTAA 1062 0.3917 MGRSPCCDESGLKKGPWTPEEDQKLVEHIQQHGHGSWRALPKLAGLNRCGKSCRLRWTNYLRPDIKRGKFSQEEEQTILHLHSILGNKWSAIATHLPGRTDNEIKNFWNTHLKKKLIQMGFDPMTHQPRTDLVSTIPYLLALANMTELMDHHHHQSSWDDQQQSAMSTLQAEAVYLAKLQCLQYLLQSSNSSLNVNNTNINSYDQNAIIANMEQQPLSLLNTISNVKQNTIMDCSQLDSAHAASFSQPLHNQSVLPHFLDPQQVSFSSQSCLNNEQSQGGTITNFATVDETSSWINVPCSAPISIPPNAAIGITSAGDASSSTSSYGGGVVGPTAAPYWSELFFEDPIMHELS* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2521 353 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 255 - -
Mal2g2521 353 CDD SANT 69 112 IPR001005 -
Mal2g2521 353 Gene3D - 69 116 - -
Mal2g2521 353 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Mal2g2521 353 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mal2g2521 353 CDD SANT 16 61 IPR001005 -
Mal2g2521 353 PANTHER TRANSCRIPTION FACTOR MYB39-LIKE 1 255 - -
Mal2g2521 353 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mal2g2521 353 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mal2g2521 353 SMART sant 66 114 IPR001005 -
Mal2g2521 353 SMART sant 13 63 IPR001005 -
Mal2g2521 353 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mal2g2521 353 Gene3D - 11 67 - -
Mal2g2521 353 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mal2g2521 353 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2521 Mal-Chr2 31955306 31956808 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2521 1 353 MYB Transcription Factor Family AT1G34670 50.900 2.02e-112 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal2g2521 Myb_DNA-binding 8.9e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2521 K09422 - gmx:100811162 427.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g2521 2 31955306 31956808 Mal2g2521 2 31955306 31956808 ECH