Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2501 ATGGTTTCAACGAGACGCAACAGTGGTGGATCTTTCTCCAACTCCGGTAAAAGACCTTCTTCTTCTTCCGATGATAAACCTCCTCCTTCTCCTTCATCTAAGCGCCAAAAGCCTGAAAATGGCGGTGCTTCATCGGAGAAACCGCCGGAGAATTCAAATCAAGAACCGCCTGCCGATCCCGGAAAATGTGCTGAAGCTGATGCTCAGATCGATGAACCTGTAGCTGCTGCTGATGATAAAACCGATGCAACTCCGCCGATTGCTGATGCTGCTACGCCGACTCTGGTAGCTGATAAACCTAGAGCTTCGTTTTCTTCATGGAGTTTATATCAAAAGCAAAACCCGAACCTCGAGTCTTCAGCTCCGTGGTGCCGGCTTCTGTCTCAGTCTGCACAGCATCCAAATGTTTCCATTTGCATACCGAATTTCACTATTGGCTCGAGTAGAAATTGCAACTTTCATTTGAAGGATCATACTATCAGTGGAAATTTATGCAAGATCAAACATACACAGCGCGAGGGAAGTGATGTGGCTGTGCTAGAAAGTACGGGTAGCAAAGGATCTGTGATAGTTAATGGGACACTTGTCAAGAAGAACACCTGCTGCACGCTTAACTCGGGCGATGAGGTGGTTTTTGGCTTGCATGGAAATCATTCTTACATTTTCCAGCAAGTAAACACTGAGGTTGCGGTTAAGGGTGCAGAAGTTCAGAGCGGCGTTGGTAAATTCGTGCAGCTTGAAAGGAGAAGCGGAGACCCTTCAGCTGTGGCTGGGGCTTCTATCTTGGCTTCTCTTTCTAACCTCAGACAGGATCTTACAAGATGGAAGTCCCCATCGCAGACTGCCAGTAAGCCTCACCAGGGTGCTGATGTTTCTATTCATACTGTTCTCCCTGATGGTACAGAAATTGAGCTTGATGGCCTGGGCAACTCAACTCCAAATACGGGAACTGATAAAGCTGTCGATGCTGAGGCTAGCAACAAGAACACTCCTATGGATTGCGATCCAGAGGATGCGGGCGCAGAGCCAGGCAATGTAAAATTCTCTGGGGTATTGGAAGAAAGAAATGGGGCGGAGGACATACAAGCTGCATCGACTTCGGGTACATCTGTACGCTGTGCAGTTTTTAAAGAAGAAGCTCATGCTGCAATACTGGATGGAAAAGAACTAGAAGTGTCTTTTGACAACTTCCCATACTATTTAAGCGAGAATACAAAAAATGTCCTGATTGCAGCTTGCTTTATACACCTGAAGCATAAAGAACATGCAAAGTACACTGCAGATCTTCCCACCGTAAACCCTCGTATTCTACTCTCAGGACCTGCAGGGTCAGAAATATATTCGGAGATGCTTGTAAAAGCACTTGCAAAATACTTTGGTGCTAAATTGCTCATATTTGATAGCCAATTGCTTTTGGGTGGTTTATCTTCTAAGGAAGCTGAGCTGCTCAAAGATGGGTTTAATGCCGAGAAATCTTGCAGCTGCGCAAATCAAAGTCCTACCGCAGACATGGCTAAGAGCATGGATCCTCCAGCTAGTGAAACAGATACACCTAGCTCTTCAAATGCTCCTACTCCTCATGGCCTTGAATCTCAGGCTAAGTTGGAAACTGATAGTGTACCATCTACGTTTGGGACGGCTAAAAATTGCTTGTTTAAACTAGGCGACCGGGTTAAATATAGTTCATCTTCTGCTTGTTTGTATCAGACATCTTCTTCAAGGGGTCCATCTAATGGAAGTCGGGGGAAGGTTGTCTTAATTTTCGATGATAATCCCTTGTCAAAAATTGGTGTAAGATTTGATAAACCTATACCTGATGGGGTTGATCTTGGAGGTGCCTGTGAAGGAGGTCAAGGATTTTTCTGCAACATCACTGATCTTCGATTGGAAAACAGTGGCATTGACGAACTCGACAAATCGCTTATTAATACGTTGTTTGAGGTTGTAACTAGTGAGAGTAGAAATTTACCTTTCATTTTGTTCATGAAAGAAGCAGAAAAGTCTATAGTAGGAAATGGAGATCCATATTCATTTAAAAGTAAGCTTGAAAAGCTTCCCGACAATGTGGTGGTAATAGGTTCACACATTCACTCCGACAGTCGAAAGGAGAAGTCACATGCTGGGGGTTTGCTTTTTACAAAGTTTGGCAGCAACCAGACTGCCCTTCTTGACTTGGCTTTCCCAGATAGTTTCGGAAGATTACATGACAGGGGAAAAGAAGTCCCGAAACCAAACAAAACTTTGACTAAGCTATTTCCTAATAAAGTAACAATTCACATGCCACAGGAGGAGGCACTTCTAGCATCATGGAAACAGCAACTTGATCGAGATGTGGAGACTCTTAAAATCAAAGGAAATTTGCACCATTTGCGTACCGTTTTAAGCCGTAGTGGGATGGAATCTGACGGACTCGAGAGCTTGTGTGTCAAGGATCTGACACTTACAAATGAAAATTCAGAGAAGATTGTTGGTTGGGCTTTAAGCCACCATTTAATGCAGAATCCTGAAATTGACGCTGATGCAAAGCTTGTGTTGTCTTGTGAGAGCATCCAGTATGGAATTGGGATCTTTCAGGCTATCCAGAATGAGTCGAAGAGCCTAAAGAAATCTCTTAAGGACGTTGTAACAGAAAACGAGTTTGAAAAGAGGCTTTTGGGTGATGTTATTCCACCTAGCGACATTGGTGTTACTTTTGATGATATTGGAGCTCTTGAAAATGTTAAGGATACATTGAAGGAATTGGTGATGCTTCCTTTACAGAGGCCTGAGCTTTTTTGCAAGGGGCAGTTAACCAAGCCATGCAAGGGTATTCTATTATTTGGCCCCCCGGGAACAGGTAAGACAATGCTTGCCAAGGCAGTTGCTACCGACGCCGGTGCAAACTTCATCAACATTTCTATGTCAAGCATCACATCTAAGTGGTTTGGCGAGGGTGAAAAATACGTCAAAGCTGTTTTCTCCCTGGCAAGTAAAATTGCTCCCAGTGTGATATTTGTGGATGAAGTTGATAGCATGTTGGGCAGGAGGGAAAATCCAGGGGAGCACGAAGCCATGCGAAAGATGAAAAATGAATTCATGGTGAACTGGGATGGCTTACGTACAAAGGATACTGAACGAGTTCTTGTGCTTGCAGCCACGAATAGACCTTATGACCTTGATGAGGCTGTCATACGAAGGCTTCCTCGGAGATTAATGGTAAATTTACCAGATGCTCCAAATAGAGCTAAAATATTGAAAGTTATACTGGCAAAAGAGGACTTGTCTTCTGATGTTGATCTGGGTGCAATTGCAAACATGACTGACGGATATTCTGGAAGTGATCTTAAGAACTTGTGTGTAACTGCTGCACACCGTCCTATTAAAGAGATTTTGGAAAAGGAAAAAAAGGAACTTGCTGCTGCTCTAGCAGAAGGTAGACCTGCACCTGCACTGCGTGGAAGTGGTGATATTCGATCTTTAAACATGGAAGATTTTAAGCATGCTCACCAACAGGTATGTGCAAGTGTTTCCTCTGAATCAGTAAATATGACGGAGCTTGTTCAATGGAATGAACTCTATGGTGAAGGTGGTTCAAGAGTTAAGAAAGCACTAAGCTATTTCATGTGA 3606 0.4368 MVSTRRNSGGSFSNSGKRPSSSSDDKPPPSPSSKRQKPENGGASSEKPPENSNQEPPADPGKCAEADAQIDEPVAAADDKTDATPPIADAATPTLVADKPRASFSSWSLYQKQNPNLESSAPWCRLLSQSAQHPNVSICIPNFTIGSSRNCNFHLKDHTISGNLCKIKHTQREGSDVAVLESTGSKGSVIVNGTLVKKNTCCTLNSGDEVVFGLHGNHSYIFQQVNTEVAVKGAEVQSGVGKFVQLERRSGDPSAVAGASILASLSNLRQDLTRWKSPSQTASKPHQGADVSIHTVLPDGTEIELDGLGNSTPNTGTDKAVDAEASNKNTPMDCDPEDAGAEPGNVKFSGVLEERNGAEDIQAASTSGTSVRCAVFKEEAHAAILDGKELEVSFDNFPYYLSENTKNVLIAACFIHLKHKEHAKYTADLPTVNPRILLSGPAGSEIYSEMLVKALAKYFGAKLLIFDSQLLLGGLSSKEAELLKDGFNAEKSCSCANQSPTADMAKSMDPPASETDTPSSSNAPTPHGLESQAKLETDSVPSTFGTAKNCLFKLGDRVKYSSSSACLYQTSSSRGPSNGSRGKVVLIFDDNPLSKIGVRFDKPIPDGVDLGGACEGGQGFFCNITDLRLENSGIDELDKSLINTLFEVVTSESRNLPFILFMKEAEKSIVGNGDPYSFKSKLEKLPDNVVVIGSHIHSDSRKEKSHAGGLLFTKFGSNQTALLDLAFPDSFGRLHDRGKEVPKPNKTLTKLFPNKVTIHMPQEEALLASWKQQLDRDVETLKIKGNLHHLRTVLSRSGMESDGLESLCVKDLTLTNENSEKIVGWALSHHLMQNPEIDADAKLVLSCESIQYGIGIFQAIQNESKSLKKSLKDVVTENEFEKRLLGDVIPPSDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATDAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERVLVLAATNRPYDLDEAVIRRLPRRLMVNLPDAPNRAKILKVILAKEDLSSDVDLGAIANMTDGYSGSDLKNLCVTAAHRPIKEILEKEKKELAAALAEGRPAPALRGSGDIRSLNMEDFKHAHQQVCASVSSESVNMTELVQWNELYGEGGSRVKKALSYFM* 1202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2501 1201 MobiDBLite consensus disorder prediction 307 324 - -
Mal2g2501 1201 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 77 1201 - -
Mal2g2501 1201 MobiDBLite consensus disorder prediction 1 52 - -
Mal2g2501 1201 CDD FHA 123 223 IPR000253 GO:0005515
Mal2g2501 1201 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 896 1176 IPR027417 -
Mal2g2501 1201 MobiDBLite consensus disorder prediction 302 340 - -
Mal2g2501 1201 SUPERFAMILY SMAD/FHA domain 107 223 IPR008984 GO:0005515
Mal2g2501 1201 MobiDBLite consensus disorder prediction 1 70 - -
Mal2g2501 1201 PANTHER ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 1-A ISOFORM 1 77 1201 - -
Mal2g2501 1201 Gene3D - 122 231 - -
Mal2g2501 1201 MobiDBLite consensus disorder prediction 76 95 - -
Mal2g2501 1201 CDD AAA 935 1068 - -
Mal2g2501 1201 Pfam FHA domain 144 213 IPR000253 GO:0005515
Mal2g2501 1201 Gene3D - 1069 1163 - -
Mal2g2501 1201 MobiDBLite consensus disorder prediction 512 528 - -
Mal2g2501 1201 Pfam ATPase family associated with various cellular activities (AAA) 937 1066 IPR003959 GO:0005524|GO:0016887
Mal2g2501 1201 SMART AAA_5 933 1070 IPR003593 -
Mal2g2501 1201 Pfam AAA+ lid domain 1090 1125 IPR041569 -
Mal2g2501 1201 ProSitePatterns AAA-protein family signature. 1040 1059 IPR003960 GO:0005524|GO:0016887
Mal2g2501 1201 MobiDBLite consensus disorder prediction 500 529 - -
Mal2g2501 1201 Gene3D - 895 1176 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2501 Mal-Chr2 31679303 31690683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2501 896 1144 Calmodulin-binding Proteins AT3G56690 40.234 3.13e-42 166
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g2501 2 31679303 31690683 Mal2g2501 2 31679303 31690683 ECH
Mal5g3985 5 109554079 109562666 Mal2g2501 2 31679303 31690683 PCT