Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2472 ATGATGGATGGGCGGCGGCATTCTGTTGACATACCGATTTCTAAGGCTCTTGTAGCATTGAGGAGAGTCAGGTCATTGAAGGATCCATCAACTAATTCTATGACCAATCATTCTCCTTTGATCGACAACTTACACTGGGAAAACGGTTCTGGCAATGGAATTTCTCTGATGTTTCCGGATGATGTTCATGCTTTTGATTCTGATGATAACCTTGCGTTTAGATCAAGGAATTTACGTTTCAAGGGGAGAAGAGAACTGGATACTGCCGGTTTTGAGTCAAAGCATGACCGGTTCAATTCAAGGCTGAATCAACAAAGTGTTTATGGAAAAAAATCACGTAGTGAAAGCTGTGGCAGCAACCATAGTGGTAAAGGATTAGATATTAACGAGTTCAAGGATGGGGAATTATACTATAGAGCAACCGGAAGATCATCTATATTAGGGAGAATGGATCACGCTAAGTCAGCTAAAAAACCTCTACGCATGAATCAAGTTAAACCATCTGATGCGTTGGGAGATATTGCTAGCCATTTGAGCAGTCCATGCCTTTCTGTTCGTGATGCTTTATCACCCCATGGTTCCCTGGCACTTATAAAACAAGATTTTGGTGTTCAAGATAATGGTGAAAATGGATGTGGAGTAGGCTGTTGTTGGTCAAAATCTCCGAGGTTTAGAGAATCAAATCTTTATTGTGAGAAAGAAGACCGTCCCTTGATATTGCACTGCGTTGATGACACGAGTCTTAACGGGCATAGAAATGTGAGACACAATGGTGATGAAATTAGTCCAAATTTGGAAACACCTAGAATGTTATCTATGAAATTCAGACCTAAATCATTTGATGATTTGGTGGGACAAGATATGGTAGTTAGGTCTCTTTTGGGTGCACTCTCTAGTAGAAGGATAACATCATTTTATCTCTTCCATGGTCCGCGTGGTACCGGCAAGACCTCTGCCTCAAGAATATTTGCTTCTGCACTGAATTGCCTCTCTAATGAGGAGCAAAGACCATGTGGCCTTTGTAGAGAATGTGTTTTATTCTTTTCTGGAAGAAGTAAAGATGTTAAGGAAGTGGATTCTGTGAGAATCAATCATACAGACCAGGTTAAATCCCTTGTGAAGAATGCGTGTACACCTCCTATTTCCTCTCGTTTTAAGGTTTTCATTATTGACGAGTGCCAGTTATTGAACCCCGAGACATGGGCATGCCTTTCAATCAACCAAGAGAACATTTCTCAACATGCCGTTTTTGTGATGATAACTCCTGATTTGGATAAGCTTCCTCAAAGTGCAGTTTCCCGGGCTCAGAAGTATTACTTTCCGAAGGTTCAAGACGCAGACATCGCTTGCCGATTAGAAAAAATTTGTGCAGAAGAAGACCTTGATTTTGAACAGGCTGCTTTGGACCTTATTGCTGCAAGATCCTGTGGTTCTGTTAGGGATGCAGAAATTATGCTTGATCAGCTGAGTTTGCTTGGTAAAAAGATCGAAGTTTCCTTAGTTTATGAGCTTACTGGGATTGTTTCTGATGATGAATTGCTTGATTTGCTTGATCTGGCTTTGTCACCTGACACAACAAATACAGTTATAAGAGCTCGCGAGCTGATGAGATCAAGGATCGATCCTTTGCAACTTGTGTCACAGTTGGCGAATCTCATAATGGACATCCTCACGGGGAATCATGAAAATGGTGGTGATGAAGTCAGAAGTAGATTCTCTACTAGATATACTTCGGAAGCAGACCTTTGGAAACTAAGTCATGCATTGAGAATATTTTCTGAAACCGAGAAACAGTTGAGAATTTCTAAAAATCAAACAACATGGTTCACTGTAGCTCTTCTACAGTTAAGCTCTATTGATTATCCTACCACAGATGCCGATGGTACCAAGTTGTCTCTGAGAGGGCAGAGCATGGAACATTTTGCTGCAGGTAGTTGTGAAAACAAATCATTTAGATTAGTGGCGCAGGAGGATCACGAGGGAACACTGGATTCCATATGGTATAAAGCTACTGGGATATGTCAATCTAGTCAGCTCAAAACTTTTCTCAGGAAGAAGGGAAAGTTGTCTTCACTTCATGTTGATCAATCTACATCTTCTCTTGCTATTGCGGAGTTGGAGTTCGGTCGTCGCCGCCATGTATCCAAGGCTGAGAAGTCATGGAAATCGATAGCAAGTTCCTTGCAGGGCATATTGGGTTGTAACATTGAGTTGAGGATCAGTTATGTACCTCTTAGTACTTCCATTTCACCAAAGAGGTCATCTTTCAGCATCTTTAATTGTTCCCGCAAAATACAACAGATATCATCCTCCTCTAATGAACAAGAAAGTGAAATAGACTATGCTGATTACGCCTCTGAAAATCCCATTATGAAGAATAAAACACTATCATCTTCTTCCTCCTATCGTGGATCTCAGGTTCCGCCACAGAATTCTTTTAACGGAATGGACCTTGTATCGACTCTGAGGAGCTGTGAAGGGAACTTGCTCAGCTCACGAGAAATATTTTTGAACAGGTCTTTGCAAGAGATTGTGGGAGCATCAAATTCTGGAGTCCATTCTTTCAAGGAAGAGGGACACAATGGTGCACATTTAGTTCCATCAATCCCTAATAATTCAGATAATCAGTCTAACTGTTTTCCTCAAACTCTCTGGTTTCAAAAGAAGTTCCGTTCTTCGAATTCATCCAAGATGTCTTTTCAATAG 2706 0.4098 MMDGRRHSVDIPISKALVALRRVRSLKDPSTNSMTNHSPLIDNLHWENGSGNGISLMFPDDVHAFDSDDNLAFRSRNLRFKGRRELDTAGFESKHDRFNSRLNQQSVYGKKSRSESCGSNHSGKGLDINEFKDGELYYRATGRSSILGRMDHAKSAKKPLRMNQVKPSDALGDIASHLSSPCLSVRDALSPHGSLALIKQDFGVQDNGENGCGVGCCWSKSPRFRESNLYCEKEDRPLILHCVDDTSLNGHRNVRHNGDEISPNLETPRMLSMKFRPKSFDDLVGQDMVVRSLLGALSSRRITSFYLFHGPRGTGKTSASRIFASALNCLSNEEQRPCGLCRECVLFFSGRSKDVKEVDSVRINHTDQVKSLVKNACTPPISSRFKVFIIDECQLLNPETWACLSINQENISQHAVFVMITPDLDKLPQSAVSRAQKYYFPKVQDADIACRLEKICAEEDLDFEQAALDLIAARSCGSVRDAEIMLDQLSLLGKKIEVSLVYELTGIVSDDELLDLLDLALSPDTTNTVIRARELMRSRIDPLQLVSQLANLIMDILTGNHENGGDEVRSRFSTRYTSEADLWKLSHALRIFSETEKQLRISKNQTTWFTVALLQLSSIDYPTTDADGTKLSLRGQSMEHFAAGSCENKSFRLVAQEDHEGTLDSIWYKATGICQSSQLKTFLRKKGKLSSLHVDQSTSSLAIAELEFGRRRHVSKAEKSWKSIASSLQGILGCNIELRISYVPLSTSISPKRSSFSIFNCSRKIQQISSSSNEQESEIDYADYASENPIMKNKTLSSSSSYRGSQVPPQNSFNGMDLVSTLRSCEGNLLSSREIFLNRSLQEIVGASNSGVHSFKEEGHNGAHLVPSIPNNSDNQSNCFPQTLWFQKKFRSSNSSKMSFQ* 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2472 901 MobiDBLite consensus disorder prediction 105 124 - -
Mal2g2472 901 PANTHER DNA POLYMERASE III SUBUNIT GAMMA/TAU 99 877 - -
Mal2g2472 901 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 270 492 IPR027417 -
Mal2g2472 901 CDD AAA 284 400 - -
Mal2g2472 901 Gene3D - 444 506 - -
Mal2g2472 901 TIGRFAM dnaX_nterm: DNA polymerase III, subunit gamma and tau 270 616 IPR012763 GO:0003887|GO:0005524|GO:0006260|GO:0009360
Mal2g2472 901 MobiDBLite consensus disorder prediction 105 123 - -
Mal2g2472 901 Pfam DNA polymerase III, delta subunit 286 443 - -
Mal2g2472 901 Gene3D - 263 441 IPR027417 -
Mal2g2472 901 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 99 877 - -
Mal2g2472 901 CDD HLD_clamp_pol_III_gamma_tau 445 506 IPR045085 -
Mal2g2472 901 SUPERFAMILY post-AAA+ oligomerization domain-like 507 618 IPR008921 GO:0003677|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2472 Mal-Chr2 31262003 31265590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2472 261 508 Core DNA Replication Machinery Family AT1G21690 26.587 4.74e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2472 - - gmx:100819111 1182.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g2472 2 31262003 31265590 Mal2g2472 2 31262003 31265590 ECH
Mal5g4025 5 109976031 109979567 Mal2g2472 2 31262003 31265590 PCT