Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mal2g2422 | ATGGAATCAAAACCTTTAAACACTATCAAGCTCCTCTATAGCTACGGTGGCAAGATCCTCCCTCGCTCCACCGACGGTGAACTCCGTTACCGCGGCGGTCACACTAGAGTTCTCTCCGTCGATCGTTCCATTTCGTTTTCAGAATTGATGGTTAAGCTTGGAGAATTGTGTGGTTCATCTGTGATTTTACGGTGTCAATTACCAAACGGAGACTTAGAAACGTTGATTTCCATCACCAACGACGAAGATTTAGCCAACATAATCGACGAATACGAACGTGTCTCGTTGAAACTCACTCATCCGTTGAAGATCAGAGCAATTATTTCGCAACCGAAATCGCTGTTGAAAGTTTCACCTGATCCATCGTCTTCGTCGTCCAGTACCAGTTTGTCTCCGTCCAGATCTCCTCATACCTCCGCTGAATCGCTGCCGTACGCGGTGGCGTATCGGATCGGACGTCAGAGCCGCTCGCCAAGGACGCCGGTAGGGTATTCAATCGGCGGCGTGAGAAATGGATCGGCGAAAGCTTGTTGCTATATGGGCCAGTTACAGGGAAGCCCAAGGCCCGTGTATTATTGTGGGCCTCGTTTCAATAATTACTGCCATTGA | 609 | 0.4893 | MESKPLNTIKLLYSYGGKILPRSTDGELRYRGGHTRVLSVDRSISFSELMVKLGELCGSSVILRCQLPNGDLETLISITNDEDLANIIDEYERVSLKLTHPLKIRAIISQPKSLLKVSPDPSSSSSSTSLSPSRSPHTSAESLPYAVAYRIGRQSRSPRTPVGYSIGGVRNGSAKACCYMGQLQGSPRPVYYCGPRFNNYCH* | 203 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mal2g2422 | 202 | Pfam | PB1 domain | 26 | 97 | IPR000270 | GO:0005515 | |
| Mal2g2422 | 202 | PANTHER | PB1 DOMAIN PROTEIN | 1 | 202 | - | - | |
| Mal2g2422 | 202 | Gene3D | - | 28 | 108 | - | - | |
| Mal2g2422 | 202 | SMART | PB1_new | 23 | 102 | IPR000270 | GO:0005515 | |
| Mal2g2422 | 202 | MobiDBLite | consensus disorder prediction | 115 | 139 | - | - | |
| Mal2g2422 | 202 | CDD | PB1_UP2 | 14 | 106 | - | - | |
| Mal2g2422 | 202 | SUPERFAMILY | CAD & PB1 domains | 25 | 112 | - | - | |
| Mal2g2422 | 202 | PANTHER | OS05G0427100 PROTEIN-RELATED | 1 | 202 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mal2g2422 | Mal-Chr2 | 30395949 | 30396648 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mal2g2422 | 1 | 94 | MAP Kinase Kinase Kinase | AT3G46920 | 41.489 | 1.66e-23 | 95.9 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mal2g2422 | - | - | vra:106761207 | 250.751 |
Event-related genes