Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2420 ATGACGACTCGCTTCAAGAAGAACAGGAAGAAGAGAGGTCACGTGAGCGCCGGTCACGGTCGTATCGGAAAGCATCGCAAGCATCCCGGAGGTCGTGGTAACGCCGGAGGTATGCATCACCACCGTATTCTCTTCGACAAGTACCATCCAGGTTACTTCGGTAAGGTTGGTATGCGTTACTTTCACAAGCTTCGTAACAAATTCTATTGCCCTATTGTTAACATCGACAAGATCGCCTCTCTCATTCCACAAGATGTGAAGGAGAAAGCTGCGAAGGAGAATAAAGCTCCGGTGATTGATGTTACTCAGTTTGGGTTTTTTAAGCTTCTTGGAAAAGGTGTTTTGCCTCAGAATCAGCCTTTTGTTGTTAAGACTAAGCTGATTTCGAAGATTGCTGAGAAGAAGATTAAGGAAGCTGGTGGTGCTGTTGTTCTTACTGCTTAA 444 0.455 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNKFYCPIVNIDKIASLIPQDVKEKAAKENKAPVIDVTQFGFFKLLGKGVLPQNQPFVVKTKLISKIAEKKIKEAGGAVVLTA* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2420 147 MobiDBLite consensus disorder prediction 1 35 - -
Mal2g2420 147 Gene3D - 58 147 - -
Mal2g2420 147 SUPERFAMILY Ribosomal proteins L15p and L18e 6 146 IPR036227 -
Mal2g2420 147 ProSitePatterns Ribosomal protein L15 signature. 108 140 IPR001196 GO:0003735|GO:0005840|GO:0006412
Mal2g2420 147 PANTHER 60S RIBOSOMAL PROTEIN L27A-3 1 147 - -
Mal2g2420 147 Hamap 50S ribosomal protein L15 [rplO]. 1 146 IPR030878 GO:0003735|GO:0006412|GO:0015934
Mal2g2420 147 Pfam Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 144 IPR021131 -
Mal2g2420 147 PANTHER 60S RIBOSOMAL PROTEIN L27A 1 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2420 Mal-Chr2 30363961 30364404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2420 1 147 Cytoplasmic Ribosomal Protein Gene Family AT1G70600 86.395 2.00e-91 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2420 K02900 - gmx:100798197 271.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g2420 2 30363961 30364404 Mal2g2420 2 30363961 30364404 ECH