Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2414 ATGGCATCATCAAGCTCATACAATTCACCATGTGCAGCCTGCAAATTCCTTCGTAGAAAATGCATGCCAGGTTGCATTTTTGCACCTTACTTTCCACCAGAAGAGCCACAAAAATTCGCTAATGTTCACAAGATCTTCGGCGCAAGCAACGTGACAAAGATCCTCAACGAACTCCTCCCTCACCAGAGAGAAGATGCAGTGAATTCACTTGCTTATGAAGCCGAAGCACGCGTGAGGGATCCAGTTTATGGCTGTGTTGGTGCTATCTCTTTCCTTCAGAGACAAGTTCAAAGGCTTCAAAAGGAACTTGATTCTGCTAATGCCGATCTTCTTCGCTTCGCTTATAATGACATCTCTCCTAATTCATCTCTTCCTCCTCTTCCTGCTCTTGTTGTTCCATCTTCATTTCATCATCAACAGTTAACACCTCAGAGACAATTTAGTTCAAGATTTGGTAATGGTAATGGTAATGTTGATGGAAGTGGATTTTACTCTTTCCCTTATGCTATTCCATGGAATGATACCTCTTCTGAGGATATAAGTGGAGGTGTAGGAGGAAGAGGAGGAGGTGTAGGTGGAGGTAATTTGTGA 591 0.4298 MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKILNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDSANADLLRFAYNDISPNSSLPPLPALVVPSSFHHQQLTPQRQFSSRFGNGNGNVDGSGFYSFPYAIPWNDTSSEDISGGVGGRGGGVGGGNL* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2414 196 Coils Coil 89 109 - -
Mal2g2414 196 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Mal2g2414 196 PANTHER ELONGATED PETIOLULE 1 1 184 - -
Mal2g2414 196 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 184 - -
Mal2g2414 196 MobiDBLite consensus disorder prediction 177 196 - -
Mal2g2414 196 Pfam Lateral organ boundaries (LOB) domain 10 107 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2414 Mal-Chr2 30288867 30289457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2414 1 183 AS2 family AT5G63090 64.706 4.84e-74 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mal2g2414 LOB 3.1e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2414 - - cam:101513806 293.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4074 5 111034467 111035051 Mal2g2414 2 30288867 30289457 ECH
Mal2g2414 2 30288867 30289457 Mal2g2414 2 30288867 30289457 ECH
Mal5g4074 5 111034467 111035051 Mal2g2414 2 30288867 30289457 PCT