Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2405 ATGGGTATCATCAACAACAACAACATCAATATAAAGGGAGAAATAGAGAAGGTGAATGGAAATGAACTAAGTTACAGTGATTTTGTTGAAAAATACATGGACAAGAACAAACCAGTGGTGTTAACTGGATTAATGGACCATCATTGGAGAGCTTGTACTGATTGGGTTAACCCTAATGGCAAACCCAATTTTCAGTTTTTCTTCAATCATTTTGGTGCCTCCAAAGTTCAGGTTGCAGATTGTGATACTAGAGATTTCACTGATCAAAAAAGGGAGGAGATGTTGGTCTTCGATTTCGTAGGACGTTGCCTTGAAGTTGAGGGTTCTGCAGTTCAGTGCAGTAATGAAAATGGTGCAAGTAATGGTGACTCTGTATCTGTACCGTATTTGAAGGATTGGCATTTTGTAAAGGAGTATCCAGAACATATAGCTTATATCACTCCAATGTTCTTTTGTGATGATTGGCTCAACTTTTATCTTGACAACTTCAGAATGGATACTTATTCTGACAGTGACCAGCAAAATAAGGAAATATGTTGCTCTGACTATCGTTTTGTTTACATGGGAGTAAAAGGATCTTGGACTCCTCTGCATGCTGATGTTTTCAGGTCATACAGCTGGTCAGCAAATGTCTGTGGAAAGAAGAGATGGTTTTTTCTAGATCCTTCCCAGTGTCATCTTGTGTTTGACAGGAATGCAAAAAGCTGTGTTTATAATATCTTTGATGAAGTATCTGACTCAAAATATCCTGGTTTTAAAAAGGCTATCTGGTTAGAATGCACACAGGAAGCAGGGGAAATCATATTTGTTCCCAGCGGGTGGTATCATCAAGTTCATAATTTGGAGGATACAATATCTATAAACCACAATTGGTTCAATGCCTATAACCTTTCTTGGGTGTGGAATTTACTTTTGAGCGACTACAATGAGGCCAAGGAATACATAGAAGACATCAAGGATATATGTGATGATTTTGAAGGTCTCTGTCAGCGCAACCTTGCTGCTAACACAGGGATGAATTTTTATGACTTCTTTACTTTCATTTCATACTTCACCTTGGCCAACTTGGTGCTGCTTTGCTACGTATATGGAAGAGATGGAAGTACCACTGGAAGTTTGTCAAGAGTAGCTCAGCATTTATCTTTAAATATTGGGTCTATTAGGAAGGTTGCATCAGATATGAAGCGCATGCATGCTCTAGAAGGGAATCATGATTGCATCGTGGATATGATAAAAACATTTGAAGATCCTAGGTTTTCCAAATTCTGCATGCAGGTGGGAAAAACATATTTAATGATACACGAGCAATCCAATTTGTCCTCTGATTTTGAGAGTGCTTCATTGGTTGATTTGGTGGACCTCGATGTTTTCAAAGCACACACGTCTTCTCAGGTTTACACACCCGAAGACCTCATCAAATTTATAGACAATACCGTCACAGAACTGGGCAACCTTTACATGGAGTCATCTGTACTGCGCGTTGCTTGA 1488 0.3898 MGIINNNNINIKGEIEKVNGNELSYSDFVEKYMDKNKPVVLTGLMDHHWRACTDWVNPNGKPNFQFFFNHFGASKVQVADCDTRDFTDQKREEMLVFDFVGRCLEVEGSAVQCSNENGASNGDSVSVPYLKDWHFVKEYPEHIAYITPMFFCDDWLNFYLDNFRMDTYSDSDQQNKEICCSDYRFVYMGVKGSWTPLHADVFRSYSWSANVCGKKRWFFLDPSQCHLVFDRNAKSCVYNIFDEVSDSKYPGFKKAIWLECTQEAGEIIFVPSGWYHQVHNLEDTISINHNWFNAYNLSWVWNLLLSDYNEAKEYIEDIKDICDDFEGLCQRNLAANTGMNFYDFFTFISYFTLANLVLLCYVYGRDGSTTGSLSRVAQHLSLNIGSIRKVASDMKRMHALEGNHDCIVDMIKTFEDPRFSKFCMQVGKTYLMIHEQSNLSSDFESASLVDLVDLDVFKAHTSSQVYTPEDLIKFIDNTVTELGNLYMESSVLRVA* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2405 495 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE JMJD4 10 481 - -
Mal2g2405 495 ProSiteProfiles JmjC domain profile. 128 308 IPR003347 -
Mal2g2405 495 Gene3D Cupin 4 292 - -
Mal2g2405 495 SMART cupin_9 135 308 IPR003347 -
Mal2g2405 495 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 10 481 - -
Mal2g2405 495 Pfam Cupin-like domain 27 291 IPR041667 -
Mal2g2405 495 SUPERFAMILY Clavaminate synthase-like 10 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2405 Mal-Chr2 30134352 30137885 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2405 13 300 Glycosyltransferase AT1G78280 23.588 4.58e-13 70.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mal2g2405 Cupin_8 2e-22 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2405 - - gmx:100803814 817.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g2405 2 30134352 30137885 Mal2g2405 2 30134352 30137885 ECH